RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 OR1M1Q8NGA1 313 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 ITLN1Q8WWA0 313 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 TMEM203Q969S6 136 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 TMIGD2Q96BF3 282 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 MICU1Q9BPX6 476 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 RTL8AQ9BWD3 113 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 PKIBQ9C010 78 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 EGLN1Q9GZT9 426 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 SAP30LQ9HAJ7 183 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 TMEM138Q9NPI0 162 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 GPR173Q9NS66 373 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 TXNL4BQ9NX01 149 aaKnown RBP7.72□□□□□ -1.17
VPS53-203ENST00000401468 TAS2R4Q9NYW5 299 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 SCOCQ9UIL1 159 aa7.72□□□□□ -1.17
VPS53-203ENST00000401468 TENM1Q9UKZ4 2725 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 SHISA3A0PJX4 238 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 ZNF732B4DXR9 585 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 CDC14BO60729 498 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 GABARAPO95166 117 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 RAB3AP20336 220 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 GADD45AP24522 165 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 AZGP1P25311 298 aaKnown RBP7.71□□□□□ -1.18
VPS53-203ENST00000401468 ADMP35318 185 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 PMELP40967 661 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 GPM6AP51674 278 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 ZP1P60852 638 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 ERVK11-1P61568 191 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 IL24Q13007 206 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 RIN1Q13671 783 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 MPPED2Q15777 294 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 TIMM50Q3ZCQ8 353 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 FAM120AOSQ5T036 256 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 AVPI1Q5T686 147 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 WDR82Q6UXN9 313 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 ASCL4Q6XD76 172 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 MOB3CQ70IA8 216 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 ZNF573Q86YE8 665 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 ANKRD13BQ86YJ7 626 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 SAXO1Q8IYX7 474 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 NKAIN3Q8N8D7 197 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 SCCPDHQ8NBX0 429 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 Q8NFD4 153 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 OR51A2Q8NGJ7 313 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 OR13C9Q8NGT0 318 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 OR10Z1Q8NGY1 313 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 OR8S1Q8NH09 359 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 AQP3Q92482 292 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 RDH5Q92781 318 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 YIPF5Q969M3 257 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 ORAI1Q96D31 301 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 C1orf159Q96HA4 380 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 RNF170Q96K19 258 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 GFI1Q99684 422 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 FUNDC2Q9BWH2 189 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 SHARPINQ9H0F6 387 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 OR51E2Q9H255 320 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 CKLFQ9UBR5 152 aa7.71□□□□□ -1.18
VPS53-203ENST00000401468 IGHV1-69-2A0A0G2JMI3 117 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 SRRM5B3KS81 715 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 J3QT63 122 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 CSF3P09919 207 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 BDKRB2P30411 391 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 RBP2P50120 134 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 DSCR9P59020 149 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 KISS1Q15726 138 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 CTF1Q16619 201 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 CR1LQ2VPA4 569 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 KRTAP24-1Q3LI83 254 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 HSD17B12Q53GQ0 312 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 PRAMEF6Q5VXH4 476 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 FAM166AQ6J272 317 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 RNF144BQ7Z419 303 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 CALHM1Q8IU99 346 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 ZSCAN4Q8NAM6 433 aaPredicted RBP7.7□□□□□ -1.18
VPS53-203ENST00000401468 OR52N4Q8NGI2 321 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 RPL3LQ92901 407 aaKnown RBP7.7□□□□□ -1.18
VPS53-203ENST00000401468 CPNE2Q96FN4 548 aaPredicted RBP7.7□□□□□ -1.18
VPS53-203ENST00000401468 HIST1H2AAQ96QV6 131 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 BCL7BQ9BQE9 202 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 UQCC2Q9BRT2 126 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 METTL17Q9H7H0 456 aaPredicted RBP7.7□□□□□ -1.18
VPS53-203ENST00000401468 FN3KRPQ9HA64 309 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 RHOFQ9HBH0 211 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 NEK6Q9HC98 313 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 HES4Q9HCC6 221 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 SNTG1Q9NSN8 517 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 DECR2Q9NUI1 292 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 SSR3Q9UNL2 185 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 SLC7A11Q9UPY5 501 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 PPP1R3CQ9UQK1 317 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 CACNG2Q9Y698 323 aa7.7□□□□□ -1.18
VPS53-203ENST00000401468 A0A0G2JK05 382 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 A0A1W2PPK0 400 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 FAM157AC9JC47 383 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 TMEM178BH3BS89 294 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.69□□□□□ -1.18
VPS53-203ENST00000401468 NDUFS8O00217 210 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 PGA5P0DJD9 388 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 SRD5A1P18405 259 aa7.69□□□□□ -1.18
VPS53-203ENST00000401468 CALRP27797 417 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms