RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 LY6HO94772 140 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 MPIG6BO95866 241 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 IGLV1-44P01699 117 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 CD1AP06126 327 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 SFTPBP07988 381 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 TMEM225BP0DP42 221 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 SFTPCP11686 197 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 ARSBP15848 533 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 CHRNB4P30926 498 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 MAP2K3P46734 347 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 AKR1D1P51857 326 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 MALLQ13021 153 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 TCTE3Q8IZS6 198 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 SLAMF9Q96A28 289 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 C12orf57Q99622 126 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 CHST5Q9GZS9 411 aa9.99□□□□□ -0.81
SKA3-203ENST00000400018 LOC100289279A0A1B0GTE1 492 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.98□□□□□ -0.81
SKA3-203ENST00000400018 A0A1W2PPR1 153 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 ZNF732B4DXR9 585 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 MLNRO43193 412 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 SPRY3O43610 288 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 C1QBP02746 253 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 CD3GP09693 182 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 VSIG8P0DPA2 414 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 CDK2P24941 298 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 MRPL28Q13084 256 aaKnown RBP9.98□□□□□ -0.81
SKA3-203ENST00000400018 RAB11BQ15907 218 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 PIGYQ3MUY2 71 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 PYDC2Q56P42 97 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 HIST2H2BCQ6DN03 193 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 CCDC190Q86UF4 302 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 MRPL37Q9BZE1 423 aaKnown RBP9.98□□□□□ -0.81
SKA3-203ENST00000400018 OBP2BQ9NPH6 170 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 PEX16Q9Y5Y5 336 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 AUP1Q9Y679 476 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 A0A0A6YYD4 124 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 FAM221AA4D161 298 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 TIMM8AO60220 97 aaPredicted RBP9.98□□□□□ -0.81
SKA3-203ENST00000400018 CRYAAP02489 173 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 CEBPDP49716 269 aaPredicted RBP9.98□□□□□ -0.81
SKA3-203ENST00000400018 OR8B8Q15620 311 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 SLC25A26Q70HW3 274 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 LYPD6Q86Y78 171 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 BOLLQ8N9W6 283 aaKnown RBP9.98□□□□□ -0.81
SKA3-203ENST00000400018 ITLN2Q8WWU7 325 aaPredicted RBP9.98□□□□□ -0.81
SKA3-203ENST00000400018 MAFIPQ8WZ33 124 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 ATG5Q9H1Y0 275 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 RBFOX1Q9NWB1 397 aaKnown RBP9.98□□□□□ -0.81
SKA3-203ENST00000400018 STEAP1Q9UHE8 339 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 MRPS28Q9Y2Q9 187 aaKnown RBP9.98□□□□□ -0.81
SKA3-203ENST00000400018 HECTD1Q9ULT8 2610 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 ARFGEF3Q5TH69 2177 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 WNT9BO14905 357 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 PEX14O75381 377 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 CRTAPO75718 401 aaPredicted RBP9.98□□□□□ -0.81
SKA3-203ENST00000400018 CNOT4O95628 575 aaKnown RBP9.98□□□□□ -0.81
SKA3-203ENST00000400018 VEGFCP49767 419 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 DGCR2P98153 550 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 SCN1BQ07699 218 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 HAGHLQ6PII5 290 aaPredicted RBP9.98□□□□□ -0.81
SKA3-203ENST00000400018 OR5T2Q8NGG2 359 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 CCDC32Q9BV29 185 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 MS4A7Q9GZW8 240 aaPredicted RBP9.98□□□□□ -0.81
SKA3-203ENST00000400018 WDR13Q9H1Z4 485 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 SPATA2Q9UM82 520 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 ATP23Q9Y6H3 246 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 HCFC1P51610 2035 aa9.98□□□□□ -0.81
SKA3-203ENST00000400018 TRAV20A0A0B4J274 112 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 A0A1W2PQ09 198 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 CDIPTO14735 213 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 SOCS1O15524 211 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 RAF1P04049 648 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 GABRR1P24046 479 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 SRSF1Q07955 248 aaKnown RBP eCLIP9.97□□□□□ -0.811e-8■■■■□ 26.4
SKA3-203ENST00000400018 XKRXQ6PP77 449 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 TPRA1Q86W33 373 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 ZNF680Q8NEM1 530 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 PIK3IP1Q96FE7 263 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 BORCS8Q96FH0 119 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 C1orf147Q96MC9 270 aaPredicted RBP9.97□□□□□ -0.81
SKA3-203ENST00000400018 KCNJ16Q9NPI9 418 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 CACNG2Q9Y698 323 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 ZNF816-ZNF321PA0A0X1KG74 233 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 TUBAL3A6NHL2 446 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 PRSS44E7EML9 344 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 SLC17A2O00624 439 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 XRCC2O43543 280 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 HTR3BO95264 441 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 GALP22466 123 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 EVX1P49640 407 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 TFF3Q07654 80 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 ZNF273Q14593 569 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 GLT8D1Q68CQ7 371 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 TMEM211Q6ICI0 200 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 TEX261Q6UWH6 196 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 C1orf162Q8NEQ5 155 aaPredicted RBP9.97□□□□□ -0.81
SKA3-203ENST00000400018 STEAP2Q8NFT2 490 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 OR2Z1Q8NG97 314 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 SPSB4Q96A44 273 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms