RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 CST4P01036 141 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 TRGC2P03986 189 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 TRGC1P0CF51 173 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 ID4P47928 161 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 BIDP55957 195 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 EGR3Q06889 387 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 ZNF616Q08AN1 781 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 SOHLH1Q5JUK2 328 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 RPL7L1Q6DKI1 246 aaKnown RBP4.43□□□□□ -1.7
SSR1-202ENST00000397511 KCTD18Q6PI47 426 aaPredicted RBP4.43□□□□□ -1.7
SSR1-202ENST00000397511 COX15Q7KZN9 410 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 RABEPKQ7Z6M1 372 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 ZNF440Q8IYI8 595 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 ZNF101Q8IZC7 436 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 ZDHHC22Q8N966 263 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 SUMF2Q8NBJ7 301 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 OR9K2Q8NGE7 335 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 OR52N4Q8NGI2 321 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 SNIP1Q8TAD8 396 aaKnown RBP4.43□□□□□ -1.7
SSR1-202ENST00000397511 HPSE2Q8WWQ2 592 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 C22orf15Q8WYQ4 148 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 DAZLQ92904 295 aaKnown RBP4.43□□□□□ -1.7
SSR1-202ENST00000397511 SEH1LQ96EE3 360 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 NICN1Q9BSH3 213 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 CST11Q9H112 138 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 GAL3ST2Q9H3Q3 398 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 ZNF576Q9H609 170 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 FAM212BQ9NTI7 297 aaPredicted RBP4.43□□□□□ -1.7
SSR1-202ENST00000397511 PITPNC1Q9UKF7 332 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 VSIG4Q9Y279 399 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 LNP1A1A4G5 178 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 RAB27BO00194 218 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 PLPP3O14495 311 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 TP53I11O14683 189 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 DUS4LO95620 317 aaKnown RBP4.43□□□□□ -1.7
SSR1-202ENST00000397511 GCGP01275 180 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 H2BFMP0C1H6 154 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 OR13C7P0DN81 318 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 EPHA1P21709 976 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 BCKDHBP21953 392 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 APLNRP35414 380 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 PMPCAQ10713 525 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 ELOBQ15370 118 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 SGCBQ16585 318 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 GALNTL5Q7Z4T8 443 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 MRPL52Q86TS9 123 aaKnown RBP4.43□□□□□ -1.7
SSR1-202ENST00000397511 FJX1Q86VR8 437 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 OR1N1Q8NGS0 311 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 OR2I1PQ8NGU4 316 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 MFSD8Q8NHS3 518 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 STT3BQ8TCJ2 826 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 Q8WTZ3 238 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 SLC41A2Q96JW4 573 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 ADGRG7Q96K78 797 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 BANF2Q9H503 90 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 CNTD2Q9H8S5 307 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 PARD6AQ9NPB6 346 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 SLC17A5Q9NRA2 495 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 ZNF107Q9UII5 783 aaPredicted RBP4.43□□□□□ -1.7
SSR1-202ENST00000397511 OR52A1Q9UKL2 312 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 GAB2Q9UQC2 676 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 SLC5A6Q9Y289 635 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 FBXO7Q9Y3I1 522 aa4.43□□□□□ -1.7
SSR1-202ENST00000397511 AHCTF1Q8WYP5 2266 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 A0A087WWC5 75 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 IGHV1OR21-1A0A087WYE8 117 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 IGLV1-36A0A0B4J1U3 117 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 A8MVM7 634 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 CDRT15L2A8MXV6 281 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 MS4A18H0YCH9 400 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 H0YIZ8 118 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 SLC17A2O00624 439 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 ITGB1BP1O14713 200 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 ZNHIT1O43257 154 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 TSPAN2O60636 221 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 JTBO76095 146 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 CSTBP04080 98 aaKnown RBP4.42□□□□□ -1.7
SSR1-202ENST00000397511 CXCL1P09341 107 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 ZNF735P0CB33 412 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 CD37P11049 281 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 LYL1P12980 280 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 TAGLN2P37802 199 aaKnown RBP4.42□□□□□ -1.7
SSR1-202ENST00000397511 OR3A1P47881 315 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 POLR2HP52434 150 aaKnown RBP4.42□□□□□ -1.7
SSR1-202ENST00000397511 ERVFC1-1P60608 527 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 TLE4Q04727 773 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 FOXF1Q12946 379 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 MS4A18Q3C1V0 323 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 MAJINQ3KP22 176 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 ARSJQ5FYB0 599 aaPredicted RBP4.42□□□□□ -1.7
SSR1-202ENST00000397511 ZNF584Q8IVC4 421 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 SLC25A45Q8N413 288 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 CPEB3Q8NE35 698 aaKnown RBP4.42□□□□□ -1.7
SSR1-202ENST00000397511 PLPP5Q8NEB5 264 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 OR52N5Q8NH56 324 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 OR51E1Q8TCB6 317 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 RNF128Q8TEB7 428 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 SHDQ96IW2 340 aa4.42□□□□□ -1.7
SSR1-202ENST00000397511 FAM71F1Q96KD3 344 aaPredicted RBP4.42□□□□□ -1.7
SSR1-202ENST00000397511 MRGPRX4Q96LA9 322 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms