RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 TMUB1Q9BVT8 246 aa14.33□□□□□ -0.11
TSPAN4-205ENST00000397406 METTL9Q9H1A3 318 aa14.33□□□□□ -0.11
TSPAN4-205ENST00000397406 RHBDL2Q9NX52 303 aa14.33□□□□□ -0.11
TSPAN4-205ENST00000397406 ADAM30Q9UKF2 790 aa14.33□□□□□ -0.11
TSPAN4-205ENST00000397406 TANC2Q9HCD6 1990 aa14.33□□□□□ -0.12
TSPAN4-205ENST00000397406 IGHV3-64DA0A0J9YX35 117 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 CD55P08174 381 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 RAB6AP20340 208 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 ETV6P41212 452 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 MPPED2Q15777 294 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 SLC22A6Q4U2R8 563 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 MKXQ8IYA7 352 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 MFSD4AQ8N468 514 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 KCNG3Q8TAE7 436 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 SLAMF9Q96A28 289 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 CEP19Q96LK0 163 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 OR2V2Q96R30 315 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 DIRC2Q96SL1 478 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 MTCH1Q9NZJ7 389 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 IL19Q9UHD0 177 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 RAB22AQ9UL26 194 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 ITPR3Q14573 2671 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 ZFHX3Q15911 3703 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 FAM25AB3EWG3 89 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 FAM25CB3EWG5 89 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 FAM25GB3EWG6 89 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 CDC14BO60729 498 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 RHBDL1O75783 438 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 KDM4BO94953 1096 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 SFTPBP07988 381 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 SERPINA2P20848 420 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 NPBWR2P48146 333 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 SRP9P49458 86 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 RSU1Q15404 277 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 C11orf71Q6IPW1 123 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 CNIH2Q6PI25 160 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 KRTAP1-3Q8IUG1 177 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 ZCCHC24Q8N2G6 241 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 Q8NFD4 153 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 ITLN1Q8WWA0 313 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 RAB40AQ8WXH6 277 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 FAM46BQ96A09 425 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 DIRAS2Q96HU8 199 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 CST11Q9H112 138 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 BANF2Q9H503 90 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 ELL3Q9HB65 397 aaPredicted RBP14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 MED13LQ71F56 2210 aa14.32□□□□□ -0.12
TSPAN4-205ENST00000397406 MTORP42345 2549 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 CDIPTO14735 213 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 ZNF780AO75290 641 aaPredicted RBP14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 CRTAPO75718 401 aaPredicted RBP14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 HTR3BO95264 441 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 CYB5AP00167 134 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 CD8AP01732 235 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 DANCRP0C864 163 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 BCL3P20749 454 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 TNFSF4P23510 183 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 GATA4P43694 442 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 TNFAIP6P98066 277 aaPredicted RBP14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 GPR176Q14439 515 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 DTX2Q86UW9 622 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 OR4M1Q8NGD0 313 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 S100ZQ8WXG8 99 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 MBD6Q96DN6 1003 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 SOSTQ9BQB4 213 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 TMEM59Q9BXS4 323 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 LPAR5Q9H1C0 372 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 MS4A5Q9H3V2 200 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 DYNLRB1Q9NP97 96 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 CBLN4Q9NTU7 201 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 EXTL2Q9UBQ6 330 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 POLDIP2Q9Y2S7 368 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 V9GYH0 126 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 DYSFO75923 2080 aa14.31□□□□□ -0.12
TSPAN4-205ENST00000397406 F8VVB4 439 aa14.3□□□□□ -0.12
TSPAN4-205ENST00000397406 F8VWA3 439 aa14.3□□□□□ -0.12
TSPAN4-205ENST00000397406 TRAPPC2LH3BP13 241 aa14.3□□□□□ -0.12
TSPAN4-205ENST00000397406 MPIG6BO95866 241 aa14.3□□□□□ -0.12
TSPAN4-205ENST00000397406 ACAA1P09110 424 aaPredicted RBP14.3□□□□□ -0.12
TSPAN4-205ENST00000397406 MGMTP16455 207 aa14.3□□□□□ -0.12
TSPAN4-205ENST00000397406 SNRPD2P62316 118 aaKnown RBP14.3□□□□□ -0.12
TSPAN4-205ENST00000397406 FAM209AQ5JX71 171 aa14.3□□□□□ -0.12
TSPAN4-205ENST00000397406 SPANXN2Q5MJ10 180 aa14.3□□□□□ -0.12
TSPAN4-205ENST00000397406 ELP2Q6IA86 826 aa14.3□□□□□ -0.12
TSPAN4-205ENST00000397406 WDR82Q6UXN9 313 aa14.3□□□□□ -0.12
TSPAN4-205ENST00000397406 ZNF826PQ6ZT77 177 aa14.3□□□□□ -0.12
TSPAN4-205ENST00000397406 ZNF488Q96MN9 340 aa14.3□□□□□ -0.12
TSPAN4-205ENST00000397406 DLL4Q9NR61 685 aa14.3□□□□□ -0.12
TSPAN4-205ENST00000397406 UFSP2Q9NUQ7 469 aa14.3□□□□□ -0.12
TSPAN4-205ENST00000397406 FAIMQ9NVQ4 179 aa14.3□□□□□ -0.12
TSPAN4-205ENST00000397406 NF1P21359 2839 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 A0A0A6YYD4 124 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 A6NLC8 198 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 CLDN25C9JDP6 229 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 NOS1APO75052 506 aaPredicted RBP14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 CSTBP04080 98 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 SOD3P08294 240 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 PGA5P0DJD9 388 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 CDK2P24941 298 aa14.29□□□□□ -0.12
TSPAN4-205ENST00000397406 PPOXP50336 477 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms