RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 FAM209BQ5JX69 171 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 TAAR3PQ9P1P4 343 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 CLDN15P56746 228 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 XKR7Q5GH72 579 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 NPWQ8N729 165 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 TMEM101Q96IK0 257 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 FAM72CH0Y354 149 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 HCRTR1O43613 425 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 SCRG1O75711 98 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 FAM72AQ5TYM5 149 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 FAM72DQ6L9T8 149 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 FAM72BQ86X60 149 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 PFN4Q8NHR9 129 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 CNTD2Q9H8S5 307 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 C20orf141Q9NUB4 165 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 KCNAB3O43448 404 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 PRDX1Q06830 199 aaKnown RBP12.1□□□□□ -0.47
USP49-203ENST00000394253 ZNF511Q8NB15 262 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 OR5M1Q8NGP8 315 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 DMRTA2Q96SC8 542 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 HSD17B10Q99714 261 aaKnown RBP12.1□□□□□ -0.47
USP49-203ENST00000394253 MRPL16Q9NX20 251 aaKnown RBP12.1□□□□□ -0.47
USP49-203ENST00000394253 PGPEP1Q9NXJ5 209 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 VAX2Q9UIW0 290 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 ZNF26P17031 533 aaPredicted RBP12.1□□□□□ -0.47
USP49-203ENST00000394253 LIPNQ5VXI9 398 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 ZC3HAV1LQ96H79 300 aaKnown RBP12.1□□□□□ -0.47
USP49-203ENST00000394253 ABLIM3O94929 683 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 HOXC13P31276 330 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 HTR6P50406 440 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 DUSP5Q16690 384 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 MRM1Q6IN84 353 aaKnown RBP12.1□□□□□ -0.47
USP49-203ENST00000394253 SYS1Q8N2H4 156 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 OR10G4Q8NGN3 311 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 OR10G9Q8NGN4 311 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 OR10G7Q8NGN6 311 aa12.1□□□□□ -0.47
USP49-203ENST00000394253 HOXA6P31267 233 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 TRILQ7L0X0 811 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 AGBL5Q8NDL9 886 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 CA12O43570 354 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 INHBBP09529 407 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 FNDC7Q5VTL7 733 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 APOOQ9BUR5 198 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 TRAF4Q9BUZ4 470 aaPredicted RBP12.09□□□□□ -0.47
USP49-203ENST00000394253 PPM1DO15297 605 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 CXorf1O96002 111 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 NCMAPQ5T1S8 102 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 RDH5Q92781 318 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 PYCARD-AS1I3L0S3 204 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 EIF4E2O60573 245 aaKnown RBP12.09□□□□□ -0.47
USP49-203ENST00000394253 ELFN2Q5R3F8 820 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 RHBDD2Q6NTF9 364 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 STAC2Q6ZMT1 411 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 H0YGG7 62 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 DCTDP32321 178 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 ASCL1P50553 236 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 OR4C13Q8NGP0 309 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 FHITP49789 147 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 COL19A1Q14993 1142 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 Q6ZPB1 254 aaPredicted RBP12.09□□□□□ -0.47
USP49-203ENST00000394253 MOB3BQ86TA1 216 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 SLAMF8Q9P0V8 285 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 TCFL5Q9UL49 500 aa12.09□□□□□ -0.47
USP49-203ENST00000394253 HEPACAM2A8MVW5 462 aa12.08□□□□□ -0.47
USP49-203ENST00000394253 DSCR3O14972 297 aa12.08□□□□□ -0.47
USP49-203ENST00000394253 KLF3P57682 345 aaPredicted RBP12.08□□□□□ -0.47
USP49-203ENST00000394253 PRSS8Q16651 343 aa12.08□□□□□ -0.47
USP49-203ENST00000394253 TCEAL8Q8IYN2 117 aa12.08□□□□□ -0.47
USP49-203ENST00000394253 OR51E1Q8TCB6 317 aa12.08□□□□□ -0.47
USP49-203ENST00000394253 GDE1Q9NZC3 331 aa12.08□□□□□ -0.47
USP49-203ENST00000394253 NPIPB6E9PJ23 425 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 TSPAN12O95859 305 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 MT-ND6P03923 174 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 SLC36A1Q7Z2H8 476 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 SLC35E3Q7Z769 313 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 SIRT6Q8N6T7 355 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 CLEC4DQ8WXI8 215 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 CMC2Q9NRP2 79 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 CACNA1HO95180 2353 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 ZNF142P52746 1687 aaPredicted RBP12.08□□□□□ -0.48
USP49-203ENST00000394253 GFRA2O00451 464 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 ADAM20O43506 726 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 LGALS7P47929 136 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 LYRM4Q9HD34 91 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 SLC45A1Q9Y2W3 748 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 ST6GAL1P15907 406 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 GALP22466 123 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 HINT1P49773 126 aaPredicted RBP12.08□□□□□ -0.48
USP49-203ENST00000394253 SLC35B1P78383 322 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 FBXL17Q9UF56 701 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 COA3Q9Y2R0 106 aaPredicted RBP12.08□□□□□ -0.48
USP49-203ENST00000394253 NALCNQ8IZF0 1738 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.08□□□□□ -0.48
USP49-203ENST00000394253 UNCXA6NJT0 531 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 ZNF815PA8K554 130 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 SEZ6L2Q6UXD5 910 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 ZADH2Q8N4Q0 377 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 RNF133Q8WVZ7 376 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 SMIM13P0DJ93 91 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 PI3P19957 117 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms