RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 HSPE1-MOB4S4R3N1 261 aa0.26□□□□□ -2.37
SNORD28B-201ENST00000390993 PLEKHG2Q9H7P9 1386 aa0.26□□□□□ -2.37
SNORD28B-201ENST00000390993 PTPRKQ15262 1439 aa0.26□□□□□ -2.37
SNORD28B-201ENST00000390993 CCDC88CQ9P219 2028 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 PLXNA3P51805 1871 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 GBF1Q92538 1859 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 COL4A1P02462 1669 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 UBN2Q6ZU65 1347 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 TRBV24-1A0A075B6N3 115 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 IGKV2-40A0A087WW87 121 aaPredicted RBP0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 IGHV3-43A0A0B4J1X8 118 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 A6NED7 52 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 H3BMM0 161 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 K7EPK0 472 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 RNF13O43567 381 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 CIB2O75838 187 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 GPR75O95800 540 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 IGKV1D-33P01593 117 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 IGKV1-33P01594 117 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 IGKV2D-40P01614 121 aaPredicted RBP0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 SCGB1C2P0DMR2 95 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 GTF2F2P13984 249 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 ZNF22P17026 224 aaPredicted RBP0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 PSMB9P28065 219 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 BLVRBP30043 206 aaPredicted RBP0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 ARL2P36404 184 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 MAGEA12P43365 314 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 HNMTP50135 292 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 C21orf59P57076 290 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 ZNF33AQ06730 810 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 FOXF1Q12946 379 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 IDI1Q13907 227 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 TRMT5Q32P41 509 aaKnown RBP0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 TWF2Q6IBS0 349 aaKnown RBP0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 ZNF773Q6PK81 442 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 CASC1Q6TDU7 716 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 TCF23Q7RTU1 214 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 FAM228AQ86W67 206 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 TEX9Q8N6V9 391 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 OR13C2Q8NGS9 318 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 SCGB1C1Q8TD33 95 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 C10orf105Q8TEF2 133 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 UBE2WQ96B02 151 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 FXYD5Q96DB9 178 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 YPEL4Q96NS1 127 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 SCGB3A2Q96PL1 93 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 BCL2L14Q9BZR8 327 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 UCK2Q9BZX2 261 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 SLC7A5P2Q9GIP4 190 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 ARV1Q9H2C2 271 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 C6orf50Q9HD87 102 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 DDX18Q9NVP1 670 aaKnown RBP0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 TAS2R9Q9NYW1 312 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 CYB5R1Q9UHQ9 305 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 PRO0628Q9UI54 55 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 PSORS1C2Q9UIG4 136 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 VPREB3Q9UKI3 123 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 ZNF257Q9Y2Q1 563 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 PPIL1Q9Y3C6 166 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 NOTCH1P46531 2555 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 MPDZO75970 2070 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 ATG2BQ96BY7 2078 aa0.25□□□□□ -2.37
SNORD28B-201ENST00000390993 STRCP1A6NGW2 1772 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 ZNF469Q96JG9 3925 aaPredicted RBP0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 A0A075B6Q4 140 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 CD300LBA8K4G0 201 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 LINC01619G3V211 115 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 ZBTB5O15062 677 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 TCAPO15273 167 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 EEF1E1O43324 174 aaKnown RBP0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 TRAPPC3O43617 180 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 NDUFS5O43920 106 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 ETHE1O95571 254 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 HLA-HP01893 362 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 KRT14P02533 472 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 IFNW1P05000 195 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 KRT16P08779 473 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 CPMP14384 443 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 IMPA1P29218 277 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 CRABP1P29762 137 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 YWHAEP62258 255 aaKnown RBP0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 SLC35A1P78382 337 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 PRB3Q04118 309 aaPredicted RBP0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 PMVKQ15126 192 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 SSX1Q16384 188 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 MRPL23Q16540 153 aaKnown RBP0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 HSDL1Q3SXM5 330 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 UBE2NLQ5JXB2 153 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 CLEC18BQ6UXF7 455 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 CCDC121Q6ZUS5 278 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 SSX9Q7RTT3 188 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 NIT1Q86X76 327 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 ZFP82Q8N141 532 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 FAM58AQ8N1B3 248 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 CYB561A3Q8NBI2 242 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 ZNF555Q8NEP9 628 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 OR4A5Q8NH83 315 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 ITFG1Q8TB96 612 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 UBA3Q8TBC4 463 aa0.24□□□□□ -2.37
SNORD28B-201ENST00000390993 RNF133Q8WVZ7 376 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms