RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 C16orf78Q8WTQ4 265 aa-2.14□□□□□ -2.75
TRAJ53-201ENST00000390485 ASB13Q8WXK3 278 aa-2.14□□□□□ -2.75
TRAJ53-201ENST00000390485 PLAC4Q8WY50 150 aa-2.14□□□□□ -2.75
TRAJ53-201ENST00000390485 TMEM230Q96A57 120 aa-2.14□□□□□ -2.75
TRAJ53-201ENST00000390485 RIT2Q99578 217 aa-2.14□□□□□ -2.75
TRAJ53-201ENST00000390485 COPS8Q99627 209 aa-2.14□□□□□ -2.75
TRAJ53-201ENST00000390485 MICU1Q9BPX6 476 aa-2.14□□□□□ -2.75
TRAJ53-201ENST00000390485 GSDMCQ9BYG8 508 aa-2.14□□□□□ -2.75
TRAJ53-201ENST00000390485 TMEM117Q9H0C3 514 aa-2.14□□□□□ -2.75
TRAJ53-201ENST00000390485 SYTL2Q9HCH5 934 aa-2.14□□□□□ -2.75
TRAJ53-201ENST00000390485 RRAGDQ9NQL2 400 aaPredicted RBP-2.14□□□□□ -2.75
TRAJ53-201ENST00000390485 CISHQ9NSE2 258 aa-2.14□□□□□ -2.75
TRAJ53-201ENST00000390485 NRBP2Q9NSY0 501 aa-2.14□□□□□ -2.75
TRAJ53-201ENST00000390485 ING4Q9UNL4 249 aa-2.14□□□□□ -2.75
TRAJ53-201ENST00000390485 GMEB1Q9Y692 573 aa-2.14□□□□□ -2.75
TRAJ53-201ENST00000390485 ABCC4O15439 1325 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 COL4A5P29400 1685 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 SMIM30A4D0T7 59 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 LRRIQ3A6PVS8 624 aaPredicted RBP-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 MED7O43513 233 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 GNRH2O43555 120 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 CREB3O43889 395 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 RAMP3O60896 148 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 LY6HO94772 140 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 IGLV3-1P01715 115 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 CDK1P06493 297 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 CA3P07451 260 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 HMGB2P26583 209 aaKnown RBP-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 AKT2P31751 481 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 RPL27AP46776 148 aaKnown RBP-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 RAB9AP51151 201 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 CTBP2P56545 445 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 TMEM258P61165 79 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 CDK10Q15131 360 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 TRIP10Q15642 601 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 ARHGAP11BQ3KRB8 267 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 PABPC1L2AQ5JQF8 200 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 CFAP58Q5T655 872 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 UBE2UQ5VVX9 321 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 NPSR1Q6W5P4 371 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 CCDC50Q8IVM0 306 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 ANKFN1Q8N957 763 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 LPCAT1Q8NF37 534 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 SFXN5Q8TD22 340 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 DEPDC1BQ8WUY9 529 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 BORCS5Q969J3 196 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 SNF8Q96H20 258 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 QKIQ96PU8 341 aaKnown RBP eCLIP-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 SLC39A3Q9BRY0 314 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 EMC6Q9BV81 110 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 SFXN3Q9BWM7 321 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 ULBP1Q9BZM6 244 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 TMEM231Q9H6L2 316 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 ANKHQ9HCJ1 492 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 RBFOX1Q9NWB1 397 aaKnown RBP-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 SPASTQ9UBP0 616 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 DNAJB9Q9UBS3 223 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 TRIM10Q9UDY6 481 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 NOL7Q9UMY1 257 aaKnown RBP-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 BTRCQ9Y297 605 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 TIMM10BQ9Y5J6 103 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 WDR90Q96KV7 1748 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 DHX29Q7Z478 1369 aaKnown RBP-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 SPAG17Q6Q759 2223 aa-2.15□□□□□ -2.75
TRAJ53-201ENST00000390485 CSPG4Q6UVK1 2322 aa-2.16□□□□□ -2.75
TRAJ53-201ENST00000390485 IGHV6-1A0A0B4J1U7 121 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 XKRY2A2RUG3 117 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 C11orf86A6NJI1 115 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 A8MWP6 167 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 C9JQL5 133 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 TRAPPC2LH3BP13 241 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 CDC7O00311 574 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 BTN3A3O00478 584 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 SLC25A20O43772 301 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 HSF2BPO75031 334 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 DIRAS1O95057 198 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 SOD1P00441 154 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 FOXN2P32314 431 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 NME5P56597 212 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 ACTR3P61158 418 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 CCDC70Q6NSX1 233 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 ISLR2Q6UXK2 745 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 CCDC121Q6ZUS5 278 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 GLT6D1Q7Z4J2 308 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 SLC22A9Q8IVM8 553 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 CLECL1Q8IZS7 167 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 CENPLQ8N0S6 344 aaPredicted RBP-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 OR52E2Q8NGJ4 325 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 CXorf40AQ8TE69 158 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 RXFP2Q8WXD0 754 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 OSTF1Q92882 214 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 ADTRPQ96IZ2 230 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 ALS2CR12Q96Q35 445 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 NIPAL2Q9H841 368 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 BFARQ9NZS9 450 aa-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 RPUSD1Q9UJJ7 312 aaKnown RBP-2.16□□□□□ -2.76
TRAJ53-201ENST00000390485 SMARCA4P51532 1647 aa-2.17□□□□□ -2.76
TRAJ53-201ENST00000390485 DOCK4Q8N1I0 1966 aa-2.17□□□□□ -2.76
TRAJ53-201ENST00000390485 TRIM64A6NGJ6 449 aa-2.17□□□□□ -2.76
TRAJ53-201ENST00000390485 OR2T8A6NH00 312 aa-2.17□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms