RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 HIST2H2BEQ16778 126 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 NKAIN1Q4KMZ8 207 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.14□□□□□ -0.47
SF1-205ENST00000377394 RABEPKQ7Z6M1 372 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 DPPA2Q7Z7J5 298 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 PNLDC1Q8NA58 520 aaKnown RBP12.14□□□□□ -0.47
SF1-205ENST00000377394 HIST1H2BHQ93079 126 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 GNRHR2Q96P88 292 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 CDC6Q99741 560 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 HIST1H2BNQ99877 126 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 HIST1H2BMQ99879 126 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 C2orf88Q9BSF0 95 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 UNKLQ9H9P5 680 aaKnown RBP12.14□□□□□ -0.47
SF1-205ENST00000377394 FBXL17Q9UF56 701 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 POLR1DQ9Y2S0 133 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 B3GALT1Q9Y5Z6 326 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 A0A1W2PNR3 127 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 SFTPCP11686 197 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 LYL1P12980 280 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 CCL1P22362 96 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 GABREP78334 506 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 TMEM128Q5BJH2 165 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 CARD17Q5XLA6 110 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 OR10G3Q8NGC4 313 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 LYPD6BQ8NI32 183 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 KCNG3Q8TAE7 436 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 SSC4DQ8WTU2 575 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 MTCH2Q9Y6C9 303 aa12.14□□□□□ -0.47
SF1-205ENST00000377394 TSTD3H0UI37 97 aa12.13□□□□□ -0.47
SF1-205ENST00000377394 RELQ04864 619 aaPredicted RBP12.13□□□□□ -0.47
SF1-205ENST00000377394 RHEBQ15382 184 aa12.13□□□□□ -0.47
SF1-205ENST00000377394 OR8G1Q15617 311 aa12.13□□□□□ -0.47
SF1-205ENST00000377394 COMMD2Q86X83 199 aa12.13□□□□□ -0.47
SF1-205ENST00000377394 HIST3H2BBQ8N257 126 aa12.13□□□□□ -0.47
SF1-205ENST00000377394 OR9K2Q8NGE7 335 aa12.13□□□□□ -0.47
SF1-205ENST00000377394 FAM71F1Q96KD3 344 aaPredicted RBP12.13□□□□□ -0.47
SF1-205ENST00000377394 HS3ST3B1Q9Y662 390 aa12.13□□□□□ -0.47
SF1-205ENST00000377394 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.13□□□□□ -0.47
SF1-205ENST00000377394 IGKV1-9A0A0C4DH69 117 aa12.13□□□□□ -0.47
SF1-205ENST00000377394 KLK2P20151 261 aa12.13□□□□□ -0.47
SF1-205ENST00000377394 HIST3H3Q16695 136 aa12.13□□□□□ -0.47
SF1-205ENST00000377394 ZNF610Q8N9Z0 462 aa12.13□□□□□ -0.47
SF1-205ENST00000377394 OR6X1Q8NH79 312 aa12.13□□□□□ -0.47
SF1-205ENST00000377394 BSCL2Q96G97 398 aaPredicted RBP12.13□□□□□ -0.47
SF1-205ENST00000377394 ARHGAP5-AS1Q96IT6 56 aa12.13□□□□□ -0.47
SF1-205ENST00000377394 TMEM59Q9BXS4 323 aa12.13□□□□□ -0.47
SF1-205ENST00000377394 SLC26A1Q9H2B4 701 aa12.13□□□□□ -0.47
SF1-205ENST00000377394 E9PLN8 166 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 CST4P01036 141 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 QDPRP09417 244 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 NR2C1P13056 603 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 THBS4P35443 961 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 SUPT4H1P63272 117 aaKnown RBP12.12□□□□□ -0.47
SF1-205ENST00000377394 KCNMB1Q16558 191 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 FAM69BQ5VUD6 431 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 ZNF385CQ66K41 422 aaPredicted RBP12.12□□□□□ -0.47
SF1-205ENST00000377394 MUCL1Q96DR8 90 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 GALNT14Q96FL9 552 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 KCNJ16Q9NPI9 418 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 C5orf63A6NC05 138 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 SEC14L6B5MCN3 397 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 SFT2D2O95562 160 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 CRIP3Q6Q6R5 217 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 PEG10Q86TG7 708 aaKnown RBP12.12□□□□□ -0.47
SF1-205ENST00000377394 OR2M3Q8NG83 312 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 OR5L2Q8NGL0 311 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 Q8WTZ3 238 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 RTBDNQ9BSG5 229 aaPredicted RBP12.12□□□□□ -0.47
SF1-205ENST00000377394 CRLF2Q9HC73 371 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 MYOTQ9UBF9 498 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 FLVCR1Q9Y5Y0 555 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 OR2J2O76002 312 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 HCKP08631 526 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 FCGR2CP31995 323 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 MAS1LP35410 378 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 FAM57BQ71RH2 274 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 KDF1Q8NAX2 398 aaPredicted RBP12.12□□□□□ -0.47
SF1-205ENST00000377394 POC1AQ8NBT0 407 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 OR10AD1Q8NGE0 317 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 OR14K1Q8NGZ2 314 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 RARRES2Q99969 163 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 METTL7AQ9H8H3 244 aa12.12□□□□□ -0.47
SF1-205ENST00000377394 PHOX2AO14813 284 aa12.11□□□□□ -0.47
SF1-205ENST00000377394 PPP1R2P9O14990 202 aa12.11□□□□□ -0.47
SF1-205ENST00000377394 CRTAPO75718 401 aaPredicted RBP12.11□□□□□ -0.47
SF1-205ENST00000377394 ZNF708P17019 499 aa12.11□□□□□ -0.47
SF1-205ENST00000377394 RPL12P30050 165 aaKnown RBP12.11□□□□□ -0.47
SF1-205ENST00000377394 TMEM33P57088 247 aa12.11□□□□□ -0.47
SF1-205ENST00000377394 EIF5AP63241 154 aaKnown RBP12.11□□□□□ -0.47
SF1-205ENST00000377394 DOK3Q7L591 496 aa12.11□□□□□ -0.47
SF1-205ENST00000377394 LHFPL1Q86WI0 220 aa12.11□□□□□ -0.47
SF1-205ENST00000377394 FAM89BQ8N5H3 189 aa12.11□□□□□ -0.47
SF1-205ENST00000377394 OR13G1Q8NGZ3 307 aa12.11□□□□□ -0.47
SF1-205ENST00000377394 ERGIC1Q969X5 290 aa12.11□□□□□ -0.47
SF1-205ENST00000377394 OXGR1Q96P68 337 aa12.11□□□□□ -0.47
SF1-205ENST00000377394 MRPL37Q9BZE1 423 aaKnown RBP12.11□□□□□ -0.47
SF1-205ENST00000377394 RAB18Q9NP72 206 aa12.11□□□□□ -0.47
SF1-205ENST00000377394 TGIF2-C20orf24A0A0A6YYL0 155 aa12.11□□□□□ -0.47
SF1-205ENST00000377394 FOXI3A8MTJ6 420 aaPredicted RBP12.11□□□□□ -0.47
SF1-205ENST00000377394 TRGC2P03986 189 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms