RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 PTTG2Q9NZH5 202 aa13.37□□□□□ -0.27
TMEM53-204ENST00000372243 RNF7Q9UBF6 113 aa13.37□□□□□ -0.27
TMEM53-204ENST00000372243 OR5V1Q9UGF6 321 aa13.37□□□□□ -0.27
TMEM53-204ENST00000372243 CELSR2Q9HCU4 2923 aa13.36□□□□□ -0.27
TMEM53-204ENST00000372243 PTPN13Q12923 2485 aa13.36□□□□□ -0.27
TMEM53-204ENST00000372243 LRRC30A6NM36 301 aa13.36□□□□□ -0.27
TMEM53-204ENST00000372243 TMEM14DPA8MWL7 114 aa13.36□□□□□ -0.27
TMEM53-204ENST00000372243 SRRM5B3KS81 715 aa13.36□□□□□ -0.27
TMEM53-204ENST00000372243 F12P00748 615 aaPredicted RBP13.36□□□□□ -0.27
TMEM53-204ENST00000372243 LHBP01229 141 aa13.36□□□□□ -0.27
TMEM53-204ENST00000372243 CSTBP04080 98 aaKnown RBP13.36□□□□□ -0.27
TMEM53-204ENST00000372243 SNRPBP14678 240 aaKnown RBP13.36□□□□□ -0.27
TMEM53-204ENST00000372243 PAX1P15863 534 aa13.36□□□□□ -0.27
TMEM53-204ENST00000372243 EFNA4P52798 201 aa13.36□□□□□ -0.27
TMEM53-204ENST00000372243 HIST2H2BCQ6DN03 193 aa13.36□□□□□ -0.27
TMEM53-204ENST00000372243 GCSAMQ8N6F7 178 aa13.36□□□□□ -0.27
TMEM53-204ENST00000372243 MCFD2Q8NI22 146 aa13.36□□□□□ -0.27
TMEM53-204ENST00000372243 RDH5Q92781 318 aa13.36□□□□□ -0.27
TMEM53-204ENST00000372243 CMTM3Q96MX0 182 aa13.36□□□□□ -0.27
TMEM53-204ENST00000372243 HES4Q9HCC6 221 aa13.36□□□□□ -0.27
TMEM53-204ENST00000372243 DLL4Q9NR61 685 aa13.36□□□□□ -0.27
TMEM53-204ENST00000372243 ZNF701Q9NV72 531 aaPredicted RBP13.36□□□□□ -0.27
TMEM53-204ENST00000372243 RASL12Q9NYN1 266 aa13.36□□□□□ -0.27
TMEM53-204ENST00000372243 DYSFO75923 2080 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 A0A0B4J203 849 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 hCG_1807616A0A1W2PRN6 198 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 PAHP00439 452 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 SFTPBP07988 381 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 IRF2P14316 349 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 RAB6AP20340 208 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 BCL3P20749 454 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 FBN2P35556 2912 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 NPBWR2P48146 333 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 KRTAP10-9P60411 292 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 HFEQ30201 348 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 SLC22A6Q4U2R8 563 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 C1orf87Q8N0U7 546 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 LGALS14Q8TCE9 139 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 LRRC29Q8WV35 223 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 POM121Q96HA1 1249 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 LIME1Q9H400 295 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 ELL3Q9HB65 397 aaPredicted RBP13.35□□□□□ -0.27
TMEM53-204ENST00000372243 TMEM106BQ9NUM4 274 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 NPTNQ9Y639 398 aa13.35□□□□□ -0.27
TMEM53-204ENST00000372243 TMEM272A0A1B0GTI8 110 aa13.34□□□□□ -0.27
TMEM53-204ENST00000372243 AKR7A2O43488 359 aa13.34□□□□□ -0.27
TMEM53-204ENST00000372243 HTR3BO95264 441 aa13.34□□□□□ -0.27
TMEM53-204ENST00000372243 GTF2F2P13984 249 aa13.34□□□□□ -0.27
TMEM53-204ENST00000372243 SERPINA2P20848 420 aa13.34□□□□□ -0.27
TMEM53-204ENST00000372243 FGF12P61328 243 aa13.34□□□□□ -0.27
TMEM53-204ENST00000372243 UNC119Q13432 240 aa13.34□□□□□ -0.27
TMEM53-204ENST00000372243 FAM189A2Q15884 450 aa13.34□□□□□ -0.27
TMEM53-204ENST00000372243 NHLRC3Q5JS37 347 aa13.34□□□□□ -0.27
TMEM53-204ENST00000372243 OR51T1Q8NGJ9 327 aa13.34□□□□□ -0.27
TMEM53-204ENST00000372243 COMMD3Q9UBI1 195 aa13.34□□□□□ -0.27
TMEM53-204ENST00000372243 RAB22AQ9UL26 194 aa13.34□□□□□ -0.27
TMEM53-204ENST00000372243 F8VVB4 439 aa13.33□□□□□ -0.28
TMEM53-204ENST00000372243 F8VWA3 439 aa13.33□□□□□ -0.28
TMEM53-204ENST00000372243 CDC14BO60729 498 aa13.33□□□□□ -0.28
TMEM53-204ENST00000372243 DAOP14920 347 aa13.33□□□□□ -0.28
TMEM53-204ENST00000372243 MGMTP16455 207 aa13.33□□□□□ -0.28
TMEM53-204ENST00000372243 GLRA1P23415 457 aa13.33□□□□□ -0.28
TMEM53-204ENST00000372243 FAM90A1Q86YD7 464 aa13.33□□□□□ -0.28
TMEM53-204ENST00000372243 FAM58AQ8N1B3 248 aa13.33□□□□□ -0.28
TMEM53-204ENST00000372243 OSR2Q8N2R0 312 aa13.33□□□□□ -0.28
TMEM53-204ENST00000372243 TMEM104Q8NE00 496 aa13.33□□□□□ -0.28
TMEM53-204ENST00000372243 OR5H6Q8NGV6 325 aa13.33□□□□□ -0.28
TMEM53-204ENST00000372243 OR10K1Q8NGX5 313 aa13.33□□□□□ -0.28
TMEM53-204ENST00000372243 CCL17Q92583 94 aa13.33□□□□□ -0.28
TMEM53-204ENST00000372243 NRGNQ92686 78 aa13.33□□□□□ -0.28
TMEM53-204ENST00000372243 ZNF488Q96MN9 340 aa13.33□□□□□ -0.28
TMEM53-204ENST00000372243 TMEM59Q9BXS4 323 aa13.33□□□□□ -0.28
TMEM53-204ENST00000372243 HMG20AQ9NP66 347 aa13.33□□□□□ -0.28
TMEM53-204ENST00000372243 MYOZ1Q9NP98 299 aaPredicted RBP13.33□□□□□ -0.28
TMEM53-204ENST00000372243 RBFOX1Q9NWB1 397 aaKnown RBP13.33□□□□□ -0.28
TMEM53-204ENST00000372243 A0A1W2PP11 408 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 TMEM178BH3BS89 294 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 RP2O75695 350 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 CRTAPO75718 401 aaPredicted RBP13.32□□□□□ -0.28
TMEM53-204ENST00000372243 NXPH2O95156 264 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 FSTL3O95633 263 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 COL8A2P25067 703 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 RPS27AP62979 156 aaKnown RBP13.32□□□□□ -0.28
TMEM53-204ENST00000372243 OR10K2Q6IF99 312 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 TGIF2LYQ8IUE0 185 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 EMG1Q92979 244 aaKnown RBP13.32□□□□□ -0.28
TMEM53-204ENST00000372243 YIPF5Q969M3 257 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 URM1Q9BTM9 101 aaKnown RBP13.32□□□□□ -0.28
TMEM53-204ENST00000372243 TM2D1Q9BX74 207 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 C6orf62Q9GZU0 229 aaPredicted RBP13.32□□□□□ -0.28
TMEM53-204ENST00000372243 ABCG5Q9H222 651 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 KCNK15Q9H427 330 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 BARX1Q9HBU1 254 aaPredicted RBP13.32□□□□□ -0.28
TMEM53-204ENST00000372243 CACNG2Q9Y698 323 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.32□□□□□ -0.28
TMEM53-204ENST00000372243 CTDSP2O14595 271 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 CLPXO76031 633 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 MPIG6BO95866 241 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 CYB5R3P00387 301 aaPredicted RBP13.32□□□□□ -0.28
TMEM53-204ENST00000372243 APOA1P02647 267 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms