RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 MDFIC2A0A1B0GVS7 189 aa16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 RFPL4AA6NLU0 287 aa16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 E9PI62 339 aa16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 RFPL4AL1F8VTS6 287 aa16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 F8VVB4 439 aa16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 F8VWA3 439 aa16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 CASQ2O14958 399 aaPredicted RBP16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 RNASE1P07998 156 aaKnown RBP16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 HTR1AP08908 422 aa16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 PEX2P28328 305 aa16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 RCN1Q15293 331 aa16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 SLC9A3R2Q15599 337 aa16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 DEFB112Q30KQ8 113 aa16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 RUSC1-AS1Q66K80 236 aa16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 RBMS3Q6XE24 437 aaKnown RBP16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 OR51A4Q8NGJ6 313 aa16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 TRMT10AQ8TBZ6 339 aaKnown RBP16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 SLC7A11Q9UPY5 501 aa16.88■□□□□ 0.29
SMNDC1-201ENST00000369592 IGHV1-69DA0A0B4J2H0 117 aa16.87■□□□□ 0.29
SMNDC1-201ENST00000369592 CLIC3O95833 236 aa16.87■□□□□ 0.29
SMNDC1-201ENST00000369592 IGHV1-69P01742 117 aa16.87■□□□□ 0.29
SMNDC1-201ENST00000369592 PRDX2P32119 198 aa16.87■□□□□ 0.29
SMNDC1-201ENST00000369592 GABRA2P47869 451 aa16.87■□□□□ 0.29
SMNDC1-201ENST00000369592 BAMBIQ13145 260 aa16.87■□□□□ 0.29
SMNDC1-201ENST00000369592 KLHL22Q53GT1 634 aa16.87■□□□□ 0.29
SMNDC1-201ENST00000369592 OGFRL1Q5TC84 451 aaPredicted RBP16.87■□□□□ 0.29
SMNDC1-201ENST00000369592 CRIP3Q6Q6R5 217 aa16.87■□□□□ 0.29
SMNDC1-201ENST00000369592 VMO1Q7Z5L0 202 aa16.87■□□□□ 0.29
SMNDC1-201ENST00000369592 ZNF555Q8NEP9 628 aa16.87■□□□□ 0.29
SMNDC1-201ENST00000369592 RPS4Y2Q8TD47 263 aa16.87■□□□□ 0.29
SMNDC1-201ENST00000369592 SEBOXQ9HB31 216 aaPredicted RBP16.87■□□□□ 0.29
SMNDC1-201ENST00000369592 HHLA2Q9UM44 414 aa16.87■□□□□ 0.29
SMNDC1-201ENST00000369592 FAM230AA0A1W2PPH8 454 aa16.86■□□□□ 0.29
SMNDC1-201ENST00000369592 SERPINA3P01011 423 aa16.86■□□□□ 0.29
SMNDC1-201ENST00000369592 MT-ND2P03891 347 aa16.86■□□□□ 0.29
SMNDC1-201ENST00000369592 LRRC36Q1X8D7 754 aa16.86■□□□□ 0.29
SMNDC1-201ENST00000369592 Q6YL49 198 aa16.86■□□□□ 0.29
SMNDC1-201ENST00000369592 ZNF561Q8N587 486 aa16.86■□□□□ 0.29
SMNDC1-201ENST00000369592 NPRL2Q8WTW4 380 aa16.86■□□□□ 0.29
SMNDC1-201ENST00000369592 FGGYQ96C11 551 aa16.86■□□□□ 0.29
SMNDC1-201ENST00000369592 MRPL48Q96GC5 212 aaKnown RBP16.86■□□□□ 0.29
SMNDC1-201ENST00000369592 MYCBPQ99417 103 aaPredicted RBP16.86■□□□□ 0.29
SMNDC1-201ENST00000369592 ELL3Q9HB65 397 aaPredicted RBP16.86■□□□□ 0.29
SMNDC1-201ENST00000369592 NOX4Q9NPH5 578 aa16.86■□□□□ 0.29
SMNDC1-201ENST00000369592 TRBV23-1A0A0A0MS06 115 aa16.85■□□□□ 0.29
SMNDC1-201ENST00000369592 M0R1W7 72 aa16.85■□□□□ 0.29
SMNDC1-201ENST00000369592 NXPH2O95156 264 aa16.85■□□□□ 0.29
SMNDC1-201ENST00000369592 ZFPL1O95159 310 aa16.85■□□□□ 0.29
SMNDC1-201ENST00000369592 KNG1P01042 644 aa16.85■□□□□ 0.29
SMNDC1-201ENST00000369592 HKR1P10072 659 aa16.85■□□□□ 0.29
SMNDC1-201ENST00000369592 ATF1P18846 271 aa16.85■□□□□ 0.29
SMNDC1-201ENST00000369592 MRPL28Q13084 256 aaKnown RBP16.85■□□□□ 0.29
SMNDC1-201ENST00000369592 TTC23Q5W5X9 447 aa16.85■□□□□ 0.29
SMNDC1-201ENST00000369592 C11orf42Q8N5U0 333 aa16.85■□□□□ 0.29
SMNDC1-201ENST00000369592 CNIH3Q8TBE1 160 aa16.85■□□□□ 0.29
SMNDC1-201ENST00000369592 GATAD2BQ8WXI9 593 aa16.85■□□□□ 0.29
SMNDC1-201ENST00000369592 LHX4Q969G2 390 aa16.85■□□□□ 0.29
SMNDC1-201ENST00000369592 DUX5Q96PT3 197 aa16.85■□□□□ 0.29
SMNDC1-201ENST00000369592 ANKRD65E5RJM6 399 aa16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 RNASEK-C17orf49H0YIS7 233 aa16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 ZNF737O75373 536 aa16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 ALX3O95076 343 aa16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 NDUFB7P17568 137 aa16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 DCKP27707 260 aa16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 CEBPDP49716 269 aaPredicted RBP16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 CNN3Q15417 329 aaKnown RBP16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 LAIR2Q6ISS4 152 aa16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 RNF144BQ7Z419 303 aa16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 TMEM185AQ8NFB2 350 aa16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 FBLIM1Q8WUP2 373 aa16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 H1FXQ92522 213 aaKnown RBP16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 SPSB1Q96BD6 273 aa16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 BORCS8Q96FH0 119 aa16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 CEP19Q96LK0 163 aa16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 C19orf12Q9NSK7 152 aa16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 ONECUT1Q9UBC0 465 aa16.84■□□□□ 0.29
SMNDC1-201ENST00000369592 TMEM212A6NML5 194 aa16.83■□□□□ 0.28
SMNDC1-201ENST00000369592 PRKACBP22694 351 aa16.83■□□□□ 0.28
SMNDC1-201ENST00000369592 AZGP1P25311 298 aaKnown RBP16.83■□□□□ 0.28
SMNDC1-201ENST00000369592 RBP2P50120 134 aa16.83■□□□□ 0.28
SMNDC1-201ENST00000369592 ETV1P50549 477 aa16.83■□□□□ 0.28
SMNDC1-201ENST00000369592 ACTG1P63261 375 aa16.83■□□□□ 0.28
SMNDC1-201ENST00000369592 IL18R1Q13478 541 aa16.83■□□□□ 0.28
SMNDC1-201ENST00000369592 HCP5Q6MZN7 132 aa16.83■□□□□ 0.28
SMNDC1-201ENST00000369592 SLC25A26Q70HW3 274 aa16.83■□□□□ 0.28
SMNDC1-201ENST00000369592 CMTM4Q8IZR5 234 aa16.83■□□□□ 0.28
SMNDC1-201ENST00000369592 BATF2Q8N1L9 274 aa16.83■□□□□ 0.28
SMNDC1-201ENST00000369592 DHRSXQ8N5I4 330 aa16.83■□□□□ 0.28
SMNDC1-201ENST00000369592 PARP16Q8N5Y8 322 aa16.83■□□□□ 0.28
SMNDC1-201ENST00000369592 HAVCR2Q8TDQ0 301 aa16.83■□□□□ 0.28
SMNDC1-201ENST00000369592 FAM234AQ9H0X4 552 aa16.83■□□□□ 0.28
SMNDC1-201ENST00000369592 HSPE1-MOB4S4R3N1 261 aa16.83■□□□□ 0.28
SMNDC1-201ENST00000369592 K7N7A8 449 aa16.82■□□□□ 0.28
SMNDC1-201ENST00000369592 MELTFP08582 738 aa16.82■□□□□ 0.28
SMNDC1-201ENST00000369592 RPSAP08865 295 aaKnown RBP16.82■□□□□ 0.28
SMNDC1-201ENST00000369592 ATP1B3P54709 279 aa16.82■□□□□ 0.28
SMNDC1-201ENST00000369592 DLX1P56177 255 aa16.82■□□□□ 0.28
SMNDC1-201ENST00000369592 XAF1Q6GPH4 301 aa16.82■□□□□ 0.28
SMNDC1-201ENST00000369592 ZNF529Q6P280 563 aa16.82■□□□□ 0.28
SMNDC1-201ENST00000369592 TMEM86BQ8N661 226 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms