RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 TPSD1Q9BZJ3 242 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 GTSF1LQ9H1H1 148 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 TAC3Q9UHF0 121 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 HDGFL3Q9Y3E1 203 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 CCL27Q9Y4X3 112 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 OR2W5A6NFC9 320 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 SSSCA1O60232 199 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 TNFSF15O95150 251 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 HNRNPA1P09651 372 aaKnown RBP eCLIP9.32□□□□□ -0.92
PRDM1-201ENST00000369089 TDGF1P13385 188 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 CD46P15529 392 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 HLA-GP17693 338 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 EPHA8P29322 1005 aaPredicted RBP9.32□□□□□ -0.92
PRDM1-201ENST00000369089 SLC6A9P48067 706 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 TBPL1P62380 186 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 C2orf68Q2NKX9 166 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 HNRNPA1L2Q32P51 320 aaKnown RBP9.32□□□□□ -0.92
PRDM1-201ENST00000369089 AADACL3Q5VUY0 350 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 ST6GALNAC3Q8NDV1 305 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 DOCK2Q92608 1830 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 KCNK6Q9Y257 313 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 CNTRLQ7Z7A1 2325 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 C1orf226A1L170 272 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 RAMP1O60894 148 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 SLC37A1P57057 533 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 RND3P61587 244 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 TIAL1Q01085 375 aaKnown RBP eCLIP9.32□□□□□ -0.92
PRDM1-201ENST00000369089 WBP2NLQ6ICG8 309 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 LINC01465Q8N7H1 131 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 GPR32P1Q8NGA4 272 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 PELI1Q96FA3 418 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 ZNF442Q9H7R0 627 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 IL21Q9HBE4 155 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 ZNF443Q9Y2A4 671 aaPredicted RBP9.32□□□□□ -0.92
PRDM1-201ENST00000369089 LAMB1P07942 1786 aa9.32□□□□□ -0.92
PRDM1-201ENST00000369089 J3KRW8 73 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 TFPIP10646 304 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 FCER1GP30273 86 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 VASPP50552 380 aaPredicted RBP9.31□□□□□ -0.92
PRDM1-201ENST00000369089 SNU13P55769 128 aaKnown RBP9.31□□□□□ -0.92
PRDM1-201ENST00000369089 PLAC9Q5JTB6 97 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 ERASQ7Z444 233 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 SCAMP4Q969E2 229 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 BANF2Q9H503 90 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 WDR76Q9H967 626 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 MANBALQ9NQG1 85 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 SLC2A8Q9NY64 477 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 TUBGCP6Q96RT7 1819 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 SLAQ13239 276 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 APCDD1LQ8NCL9 501 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 RARRES2Q99969 163 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 SPHK2Q9NRA0 654 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 ARAP2Q8WZ64 1704 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 IFITM10A6NMD0 228 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 RBFOX2O43251 390 aaKnown RBP eCLIP9.31□□□□□ -0.92
PRDM1-201ENST00000369089 PSG1P11464 419 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 THBS2P35442 1172 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 RAB9AP51151 201 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 EGR3Q06889 387 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 PHLDA2Q53GA4 152 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 MRGPRGQ86SM5 289 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 RNF133Q8WVZ7 376 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 NMNAT3Q96T66 252 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 HSPB8Q9UJY1 196 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 BCORQ6W2J9 1755 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 EDDM13A0A1B0GTR0 161 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 CDC14CA4D256 554 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 GDF9O60383 454 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 CLDN1O95832 211 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 ST6GAL1P15907 406 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 CEBPBP17676 345 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 WDFY1Q8IWB7 410 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 D2HGDHQ8N465 521 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 OR51A2Q8NGJ7 313 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 ALG14Q96F25 216 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 TSSK2Q96PF2 358 aa9.31□□□□□ -0.92
PRDM1-201ENST00000369089 MRPS28Q9Y2Q9 187 aaKnown RBP9.31□□□□□ -0.92
PRDM1-201ENST00000369089 MRPS18CQ9Y3D5 142 aaKnown RBP9.31□□□□□ -0.92
PRDM1-201ENST00000369089 SCN4AP35499 1836 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 GAGE12BA1L429 117 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 C11orf98E9PRG8 122 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 SIRPB1O00241 398 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 SDCBPO00560 298 aaPredicted RBP9.3□□□□□ -0.92
PRDM1-201ENST00000369089 C1QL1O75973 258 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 SLCO2B1O94956 709 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 NUDT3O95989 172 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 ZBTB25P24278 435 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 PPP1CCP36873 323 aaKnown RBP9.3□□□□□ -0.92
PRDM1-201ENST00000369089 WNT5AP41221 380 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 C10orf91Q5T1B1 145 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 AMMECR1LQ6DCA0 310 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 TEX38Q6PEX7 206 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 OR2C3Q8N628 320 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 NEIL1Q96FI4 390 aaPredicted RBP9.3□□□□□ -0.92
PRDM1-201ENST00000369089 DCBLD2Q96PD2 775 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 TMEM265A0A087WTH1 108 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 F8VVB4 439 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 F8VWA3 439 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 B3GALT2O43825 422 aa9.3□□□□□ -0.92
PRDM1-201ENST00000369089 CST7O76096 145 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms