RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 GCNT2Q8N0V5 402 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 OR13C9Q8NGT0 318 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 ST7LQ8TDW4 575 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 HIST1H2BAQ96A08 127 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 SLAMF9Q96A28 289 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 UQCC1Q9NVA1 299 aa9.32□□□□□ -0.92
TPM3-212ENST00000368533 OR5H14A6NHG9 310 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 RFPL4AA6NLU0 287 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 RFPL4AL1F8VTS6 287 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 VAMP1P23763 118 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 GTF3C1Q12789 2109 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 PYY3Q5JQD4 70 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 THEM4Q5T1C6 240 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 FDX2Q6P4F2 183 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 ARRDC1Q8N5I2 433 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 MDS2Q8NDY4 140 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 OR4D6Q8NGJ1 314 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 OR2AJ1Q8NGZ0 328 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 OR6X1Q8NH79 312 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 GPX8Q8TED1 209 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 SUCNR1Q9BXA5 334 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 RPS10P5Q9NQ39 176 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 FLVCR1Q9Y5Y0 555 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 TLX3O43711 291 aaPredicted RBP9.31□□□□□ -0.92
TPM3-212ENST00000368533 NME2P1O60361 137 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 NME2P22392 152 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 HSD11B1P28845 292 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 LHX2P50458 406 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 SCAND1P57086 179 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 RNF212Q495C1 297 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 RNASE10Q5GAN6 216 aaKnown RBP9.31□□□□□ -0.92
TPM3-212ENST00000368533 LY6G6FQ5SQ64 297 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 TMEM244Q5VVB8 128 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 STEAP2Q8NFT2 490 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 OR1J2Q8NGS2 313 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 NUDCD2Q8WVJ2 157 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 UNKLQ9H9P5 680 aaKnown RBP9.31□□□□□ -0.92
TPM3-212ENST00000368533 COMMD9Q9P000 198 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 KLRC4-KLRK1H3BQV0 150 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 HLA-AP01891 365 aaKnown RBP9.31□□□□□ -0.92
TPM3-212ENST00000368533 ZNF17P17021 662 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 GUCA1AP43080 201 aaPredicted RBP9.31□□□□□ -0.92
TPM3-212ENST00000368533 TNFSF10P50591 281 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 ATP1B3P54709 279 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 RRADP55042 308 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 SLC10A1Q14973 349 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 ZNF239Q16600 458 aaKnown RBP9.31□□□□□ -0.92
TPM3-212ENST00000368533 PDZD11Q5EBL8 140 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 KCTD9Q7L273 389 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 TRAPPC6BQ86SZ2 158 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 GVQW1Q8N7I0 195 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 CCDC54Q8NEL0 328 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 S100PBPQ96BU1 408 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 PRRX2Q99811 253 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 KLF13Q9Y2Y9 288 aaPredicted RBP9.31□□□□□ -0.92
TPM3-212ENST00000368533 COL6A6A6NMZ7 2263 aa9.31□□□□□ -0.92
TPM3-212ENST00000368533 A0A1W2PPH5 198 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 GJE1A6NN92 205 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 C9JQL5 133 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 IFNA6P05013 189 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 ZNF20P17024 532 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 CD34P28906 385 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 ID4P47928 161 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 CLDN18P56856 261 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 SSX2Q16385 188 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 BEND4Q6ZU67 534 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 MED12LQ86YW9 2145 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 NAXEQ8NCW5 288 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 SEMA6DQ8NFY4 1073 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 OR52N4Q8NGI2 321 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 FAM71F1Q96KD3 344 aaPredicted RBP9.3□□□□□ -0.92
TPM3-212ENST00000368533 IP6K3Q96PC2 410 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 SLC6A7Q99884 636 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 SELENOIQ9C0D9 397 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 CNTD2Q9H8S5 307 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 ACKR4Q9NPB9 350 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 SPRR3Q9UBC9 169 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 RNF222A6NCQ9 220 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 E9PLN8 166 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 SNRNP70P08621 437 aaKnown RBP9.3□□□□□ -0.92
TPM3-212ENST00000368533 AKR1C4P17516 323 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 CCNOP22674 350 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 CEACAM16Q2WEN9 425 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 SLC22A6Q4U2R8 563 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 SLC25A47Q6Q0C1 308 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 FAM57BQ71RH2 274 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 FJX1Q86VR8 437 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 TMEM200AQ86VY9 491 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 NPRL2Q8WTW4 380 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 KCNE4Q8WWG9 221 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 ADGRG7Q96K78 797 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 GPER1Q99527 375 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 C1orf198Q9H425 327 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 SLC17A5Q9NRA2 495 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 ZNF319Q9P2F9 582 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 ZGRF1Q86YA3 2104 aa9.3□□□□□ -0.92
TPM3-212ENST00000368533 A0A0B4J2A0 478 aa9.29□□□□□ -0.92
TPM3-212ENST00000368533 ZNF716A6NP11 495 aa9.29□□□□□ -0.92
TPM3-212ENST00000368533 DHHO43323 396 aa9.29□□□□□ -0.92
TPM3-212ENST00000368533 ARG1P05089 322 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms