RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 PPP3CBP16298 524 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF32P17041 273 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 BDKRB2P30411 391 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 PITPNBP48739 271 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 MMP15P51511 669 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 OR10A3P58181 314 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 ARF1P84077 181 aaKnown RBP5.94□□□□□ -1.46
VPS13A-201ENST00000355766 PSG4Q00888 419 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 SSBP1Q04837 148 aaKnown RBP5.94□□□□□ -1.46
VPS13A-201ENST00000355766 OR8B8Q15620 311 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 RAB11BQ15907 218 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 GAGE13Q4V321 117 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 RAB12Q6IQ22 244 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 ADAM5Q6NVV9 412 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 FAM131AQ6UXB0 335 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 UNQ6126/PRO20091Q6UXV3 157 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 C12orf54Q6X4T0 127 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 OR2W3Q7Z3T1 314 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 LYSMD2Q8IV50 215 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 SAMD12Q8N8I0 201 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 OR51A4Q8NGJ6 313 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 OR1K1Q8NGR3 316 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 APOBEC3DQ96AK3 386 aaPredicted RBP5.94□□□□□ -1.46
VPS13A-201ENST00000355766 HAVCR1Q96D42 359 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 PGAM5Q96HS1 289 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 C7orf50Q9BRJ6 194 aaKnown RBP5.94□□□□□ -1.46
VPS13A-201ENST00000355766 WNT5BQ9H1J7 359 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 PLEKHA1Q9HB21 404 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 GPR84Q9NQS5 396 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 PLSCR4Q9NRQ2 329 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 COMMD3Q9UBI1 195 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF107Q9UII5 783 aaPredicted RBP5.94□□□□□ -1.46
VPS13A-201ENST00000355766 GTF2A1LQ9UNN4 478 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 ABCA1O95477 2261 aa5.94□□□□□ -1.46
VPS13A-201ENST00000355766 DOCK7Q96N67 2140 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 DSCAMO60469 2012 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 TRAV8-7A0A075B6U6 113 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 VGLL3A8MV65 326 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 J3QRK9 145 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 P2RY10O00398 339 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 MAGEB3O15480 346 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 NDUFS7O75251 213 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 TOX4O94842 621 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 ITGA5P08648 1049 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 IL7P13232 177 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 EGR1P18146 543 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 ADRA2CP18825 462 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 ELK1P19419 428 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 PRKACBP22694 351 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 HTR2CP28335 458 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 GNALP38405 381 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 HTR5AP47898 357 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 SLC6A9P48067 706 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 SOX2P48431 317 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 AP3S2P59780 193 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 LOXL1Q08397 574 aaPredicted RBP5.93□□□□□ -1.46
VPS13A-201ENST00000355766 ARL6IP1Q15041 203 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 CNN3Q15417 329 aaKnown RBP5.93□□□□□ -1.46
VPS13A-201ENST00000355766 GSG1Q2KHT4 349 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 RSPO1Q2MKA7 263 aaPredicted RBP5.93□□□□□ -1.46
VPS13A-201ENST00000355766 TRIM16LQ309B1 348 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 PDLIM3Q53GG5 364 aaPredicted RBP5.93□□□□□ -1.46
VPS13A-201ENST00000355766 PABPC1L2AQ5JQF8 200 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 TMEM42Q69YG0 159 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 ASPHD2Q6ICH7 369 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 Q6ZNX1 250 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 IL17RELQ6ZVW7 336 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 FAM57BQ71RH2 274 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 SKA3Q8IX90 412 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 GABRG1Q8N1C3 465 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 LILRB2Q8N423 598 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 LRRC18Q8N456 261 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 DNAAF1Q8NEP3 725 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 OR1M1Q8NGA1 313 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 OR1J2Q8NGS2 313 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 OR10AC1Q8NH08 325 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 OR51E1Q8TCB6 317 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 LGALS14Q8TCE9 139 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 SMIM4Q8WVI0 70 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 BCL2L2Q92843 193 aaPredicted RBP5.93□□□□□ -1.46
VPS13A-201ENST00000355766 PPP1R14BQ96C90 147 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 S100A16Q96FQ6 103 aaKnown RBP5.93□□□□□ -1.46
VPS13A-201ENST00000355766 C16orf92Q96LL3 132 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 CLUHP3Q96NS8 147 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 GFI1Q99684 422 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 OR10A4Q9H209 315 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 RHBDL2Q9NX52 303 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 B3GNT2Q9NY97 397 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 TAS2R4Q9NYW5 299 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF224Q9NZL3 707 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 EXTL2Q9UBQ6 330 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 NOP16Q9Y3C1 178 aaKnown RBP5.93□□□□□ -1.46
VPS13A-201ENST00000355766 AK6Q9Y3D8 172 aaKnown RBP5.93□□□□□ -1.46
VPS13A-201ENST00000355766 MED12LQ86YW9 2145 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 FREM1Q5H8C1 2179 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 USF3Q68DE3 2245 aa5.93□□□□□ -1.46
VPS13A-201ENST00000355766 TENM1Q9UKZ4 2725 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 hCG_38984A0A1B0GV85 526 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 FAM25AB3EWG3 89 aa5.92□□□□□ -1.46
VPS13A-201ENST00000355766 FAM25CB3EWG5 89 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms