RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 OR2T6Q8NHC8 308 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 FIZ1Q96SL8 496 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 TRIOBPQ9H2D6 2365 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 PRSS37A4D1T9 235 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 HIST1H1DP16402 221 aaKnown RBP11.34□□□□□ -0.59
COL6A3-203ENST00000353578 SIGMAR1Q99720 223 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 RAB33BQ9H082 229 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 GUSBP08236 651 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 OTX2P32243 289 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 NNATQ16517 81 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 OR52N5Q8NH56 324 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 NTMQ9P121 344 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 C19orf53Q9UNZ5 99 aaPredicted RBP11.34□□□□□ -0.59
COL6A3-203ENST00000353578 GTF3C1Q12789 2109 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 MRPL33O75394 65 aaKnown RBP11.34□□□□□ -0.59
COL6A3-203ENST00000353578 FUT3P21217 361 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 TBC1D28Q2M2D7 210 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 TGIF2LYQ8IUE0 185 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 HHIPQ96QV1 700 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 SPHK2Q9NRA0 654 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 POLR2AP24928 1970 aaKnown RBP11.34□□□□□ -0.59
COL6A3-203ENST00000353578 GLIPR1P48060 266 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 HOXC5Q00444 222 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 NEURL1O76050 574 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 CD300CQ08708 224 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 OR4F17Q8NGA8 305 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 KCNE5Q9UJ90 142 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 MTCH2Q9Y6C9 303 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 SUMO3P55854 103 aaPredicted RBP11.34□□□□□ -0.59
COL6A3-203ENST00000353578 LINC00596Q86U02 117 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 OR10G4Q8NGN3 311 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 OR10G9Q8NGN4 311 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 OR10G7Q8NGN6 311 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 P2RY12Q9H244 342 aa11.34□□□□□ -0.59
COL6A3-203ENST00000353578 TRBV23OR9-2A0A075B6M9 112 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 H3BVH4 76 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 JAG1P78504 1218 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 FMODQ06828 376 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 DMRTA1Q5VZB9 504 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 PELI1Q96FA3 418 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 NUDT11Q96G61 164 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 HEPACAM2A8MVW5 462 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 SLC35B1P78383 322 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 ASTLQ6HA08 431 aaPredicted RBP11.33□□□□□ -0.6
COL6A3-203ENST00000353578 DLK2Q6UY11 383 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 CD207Q9UJ71 328 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 HOXB2P14652 356 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 SELENOPP49908 381 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 ADAMTSL4Q6UY14 1074 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 CPEB2Q7Z5Q1 589 aaKnown RBP11.33□□□□□ -0.6
COL6A3-203ENST00000353578 GPR84Q9NQS5 396 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 CGGBP1Q9UFW8 167 aaPredicted RBP11.33□□□□□ -0.6
COL6A3-203ENST00000353578 MARF1Q9Y4F3 1742 aaKnown RBP11.33□□□□□ -0.6
COL6A3-203ENST00000353578 HMGCLL1Q8TB92 370 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 PSMG3Q9BT73 122 aaPredicted RBP11.33□□□□□ -0.6
COL6A3-203ENST00000353578 ZMIZ1Q9ULJ6 1067 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 DSPPQ9NZW4 1301 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 ABCA3Q99758 1704 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 PPP1CAP62136 330 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.33□□□□□ -0.6
COL6A3-203ENST00000353578 COL9A3Q14050 684 aaPredicted RBP11.33□□□□□ -0.6
COL6A3-203ENST00000353578 TAAR2Q9P1P5 351 aa11.33□□□□□ -0.6
COL6A3-203ENST00000353578 UBE2CO00762 179 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 P01737 135 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 SLC25A35Q3KQZ1 300 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 LYSMD4Q5XG99 296 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 LAIR1Q6GTX8 287 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 HSPB7Q9UBY9 170 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 CASP8AP2Q9UKL3 1982 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 STATHP02808 62 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 CD1CP29017 333 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 LIAT1Q6ZQX7 453 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 LRRC18Q8N456 261 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 TMEM116Q8NCL8 245 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 SLAMF6Q96DU3 332 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 TIMM10BQ9Y5J6 103 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 TMEM250H0YL14 139 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 ERV3-1Q14264 604 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 CST9Q5W186 159 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 TEX29Q8N6K0 151 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 CRYGNQ8WXF5 182 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 SEBOXQ9HB31 216 aaPredicted RBP11.32□□□□□ -0.6
COL6A3-203ENST00000353578 ANXA10Q9UJ72 324 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 TMED7-TICAM2A0A0A6YYA0 188 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 LINC01559Q495D7 138 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 TXNDC8Q6A555 127 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 OR11H7Q8NGC8 314 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 OTOSQ8NHW6 89 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 MYOZ3Q8TDC0 251 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 GHITMQ9H3K2 345 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 OR51B4Q9Y5P0 310 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 A0A1W2PRU2 124 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 B4E171 279 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 PRSS1P07477 247 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 RELQ04864 619 aaPredicted RBP11.32□□□□□ -0.6
COL6A3-203ENST00000353578 C9orf135Q5VTT2 229 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 EGLN1Q9GZT9 426 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 SLC25A37Q9NYZ2 338 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 DLX1P56177 255 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 NUDT10Q8NFP7 164 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms