RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 CSAG2Q9Y5P2 127 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 GPR37O15354 613 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 PF4P02776 101 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 ACP1P24666 158 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 FUT7Q11130 342 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 ETFDHQ16134 617 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 PCK2Q16822 640 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 SIGIRRQ6IA17 410 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 ETFRF1Q6IPR1 90 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 DGAT2L6Q6ZPD8 337 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 CES1P1Q9UKY3 287 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 RAXQ9Y2V3 346 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 PATJQ8NI35 1801 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 CASP8AP2Q9UKL3 1982 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 LEUTXA8MZ59 168 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 HSD17B6O14756 317 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 SPINT1O43278 529 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 THBS4P35443 961 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 KCNJ3P48549 501 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 TAGLNQ01995 201 aaKnown RBP9.65□□□□□ -0.86
CLCN6-202ENST00000346436 CFHR1Q03591 330 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 TMEM88Q6PEY1 159 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 OR10AC1Q8NH08 325 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 PP6455Q8WZ26 134 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 SEH1LQ96EE3 360 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 POM121L2Q96KW2 1035 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 PCOLCE2Q9UKZ9 415 aa9.65□□□□□ -0.86
CLCN6-202ENST00000346436 SEC16AO15027 2179 aa9.65□□□□□ -0.87
CLCN6-202ENST00000346436 EPOPA6NHQ4 379 aa9.65□□□□□ -0.87
CLCN6-202ENST00000346436 PAX6P26367 422 aa9.65□□□□□ -0.87
CLCN6-202ENST00000346436 PSG6Q00889 435 aa9.65□□□□□ -0.87
CLCN6-202ENST00000346436 SLC25A26Q70HW3 274 aa9.65□□□□□ -0.87
CLCN6-202ENST00000346436 OR6K3Q8NGY3 331 aa9.65□□□□□ -0.87
CLCN6-202ENST00000346436 TMED6Q8WW62 240 aa9.65□□□□□ -0.87
CLCN6-202ENST00000346436 CIB3Q96Q77 187 aaPredicted RBP9.65□□□□□ -0.87
CLCN6-202ENST00000346436 TSPAN32Q96QS1 320 aa9.65□□□□□ -0.87
CLCN6-202ENST00000346436 SLC25A21Q9BQT8 299 aaPredicted RBP9.65□□□□□ -0.87
CLCN6-202ENST00000346436 SFXN3Q9BWM7 321 aa9.65□□□□□ -0.87
CLCN6-202ENST00000346436 ALPK2Q86TB3 2170 aa9.65□□□□□ -0.87
CLCN6-202ENST00000346436 A0A1W2PR80 420 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 XKRY2A2RUG3 117 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 C9orf172C9J069 976 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 HSBP1L1C9JCN9 74 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 PHF1O43189 567 aaPredicted RBP9.64□□□□□ -0.87
CLCN6-202ENST00000346436 XRCC3O43542 346 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 ZNF17P17021 662 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 ALOX5APP20292 161 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 AADACP22760 399 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 CDAP32320 146 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 SVBPQ8N300 66 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 RSRP1Q9BUV0 290 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 TTTY12Q9BZ98 90 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 SPAG17Q6Q759 2223 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 OR5B21A6NL26 309 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 ZNF117Q03924 483 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 ACSM1Q08AH1 577 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 MARCH1Q8TCQ1 289 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 KCNK17Q96T54 332 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 C12orf10Q9HB07 376 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 MPC1Q9Y5U8 109 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 MDH2P40926 338 aaKnown RBP9.64□□□□□ -0.87
CLCN6-202ENST00000346436 CD226Q15762 336 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 C2CD4CQ8TF44 421 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 CA10Q9NS85 328 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 K7EPK0 472 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 SMIM17P0DL12 118 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 OR2T2Q6IF00 324 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 FAM71E2Q8N5Q1 922 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 WNT2BQ93097 391 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 CLDN23Q96B33 292 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 SPSB1Q96BD6 273 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 SSX3Q99909 188 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 SEBOXQ9HB31 216 aaPredicted RBP9.64□□□□□ -0.87
CLCN6-202ENST00000346436 ZMAT5Q9UDW3 170 aaKnown RBP9.64□□□□□ -0.87
CLCN6-202ENST00000346436 LRP12Q9Y561 859 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 R4GMQ9 66 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 SHISA3A0PJX4 238 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 ERVH48-1M5A8F1 160 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 ASCL1P50553 236 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 IGFBP7Q16270 282 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 PHLDA2Q53GA4 152 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 TMEM105Q8N8V8 129 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 OR6S1Q8NH40 331 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 CXorf58Q96LI9 332 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 C20orf24Q9BUV8 137 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 NMES1Q9C002 83 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 YAE1D1Q9NRH1 226 aa9.64□□□□□ -0.87
CLCN6-202ENST00000346436 C1orf196B1AJZ1 125 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 RAB27BO00194 218 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 KIR2DS2P43631 304 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 CST9LP1Q5W188 147 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 PPP1R1CQ8WVI7 109 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 PINX1Q96BK5 328 aaKnown RBP9.63□□□□□ -0.87
CLCN6-202ENST00000346436 PRSS27Q9BQR3 290 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 RAB33BQ9H082 229 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 ELOVL5Q9NYP7 299 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 CISD1Q9NZ45 108 aaKnown RBP9.63□□□□□ -0.87
CLCN6-202ENST00000346436 MRM2Q9UI43 246 aaKnown RBP9.63□□□□□ -0.87
CLCN6-202ENST00000346436 CEP290O15078 2479 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 FAM221AA4D161 298 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms