RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 hCG_38984A0A1B0GV85 526 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 C5orf49A4QMS7 147 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 CRTAPO75718 401 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-202ENST00000345734 CD3DP04234 171 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 CSF1P09603 554 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 STOMP27105 288 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 MPGP29372 298 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 PTGFRP43088 359 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 OR3A2P47893 321 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 RRAS2P62070 204 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-202ENST00000345734 RAB1AP62820 205 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 AANATQ16613 207 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 GSG1Q2KHT4 349 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 CDNFQ49AH0 187 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 FBXW9Q5XUX1 488 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 OR2W3Q7Z3T1 314 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 BEST4Q8NFU0 473 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 OR1K1Q8NGR3 316 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 TNFAIP8L1Q8WVP5 186 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 GMPPAQ96IJ6 420 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-202ENST00000345734 SELENOIQ9C0D9 397 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 SPTBN4Q9H254 2564 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 IGKV1-27A0A075B6S5 117 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 C7orf66A4D0T2 115 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 DHRS7CA6NNS2 312 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 SULT1C2O00338 296 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 ARPC1BO15143 372 aaKnown RBP7.97□□□□□ -1.13
ATG4A-202ENST00000345734 SOCS1O15524 211 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 SS18L1O75177 396 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-202ENST00000345734 RAB12Q6IQ22 244 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 FJX1Q86VR8 437 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 PNLDC1Q8NA58 520 aaKnown RBP7.97□□□□□ -1.13
ATG4A-202ENST00000345734 OR10R2Q8NGX6 335 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 OR56B4Q8NH76 319 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 KCNG3Q8TAE7 436 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 NUDCD2Q8WVJ2 157 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 BCL2L2Q92843 193 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-202ENST00000345734 TMEM59Q9BXS4 323 aa7.97□□□□□ -1.13
ATG4A-202ENST00000345734 FAM230AA0A1W2PPH8 454 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 M0QYG6 137 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 FABP1P07148 127 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 AKAIN1P0CW23 69 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 SERPINA2P20848 420 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 ARR3P36575 388 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 MTCP1P56278 107 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 SSBP1Q04837 148 aaKnown RBP7.96□□□□□ -1.13
ATG4A-202ENST00000345734 ODF1Q14990 250 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 FCN2Q15485 313 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 ST3GAL2Q16842 350 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 PLAC9Q5JTB6 97 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 CLLU1Q5K131 121 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 TMEM42Q69YG0 159 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 IGFL3Q6UXB1 125 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 COLCA1Q6ZS62 124 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 TRAPPC6BQ86SZ2 158 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 GABRG1Q8N1C3 465 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 GVQW1Q8N7I0 195 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 C9orf106Q8NAJ2 232 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 SPSB4Q96A44 273 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 OR51J1Q9H342 316 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 POFUT1Q9H488 388 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 RGCCQ9H4X1 137 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 ELL3Q9HB65 397 aaPredicted RBP7.96□□□□□ -1.13
ATG4A-202ENST00000345734 TAS2R8Q9NYW2 309 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 COQ3Q9NZJ6 369 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 LUZP4Q9P127 313 aa7.96□□□□□ -1.13
ATG4A-202ENST00000345734 A0A1W2PR80 420 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 XRCC2O43543 280 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 PLATP00750 562 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 NRASP01111 189 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 NGFP01138 241 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 HPXP02790 462 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 IFNA4P05014 189 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 UBBP0CG47 229 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 SMIM6P0DI80 62 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 COX5BP10606 129 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 ANXA7P20073 488 aaKnown RBP7.96□□□□□ -1.14
ATG4A-202ENST00000345734 RAD52P43351 418 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 TMEM50BP56557 158 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 ACTBP60709 375 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 ZP1P60852 638 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 ACTG1P63261 375 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 ESPL1Q14674 2120 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 HLXQ14774 488 aaPredicted RBP7.96□□□□□ -1.14
ATG4A-202ENST00000345734 GUSBP1Q15486 140 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 OR8B8Q15620 311 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 STEAP1BQ6NZ63 245 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 MDP1Q86V88 176 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 RBMXL3Q8N7X1 1067 aaKnown RBP7.96□□□□□ -1.14
ATG4A-202ENST00000345734 CNEP1R1Q8N9A8 125 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 TMEM229BQ8NBD8 167 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 OR4S1Q8NGB4 309 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 OR51S1Q8NGJ8 323 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 SARAFQ96BY9 339 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 POM121L2Q96KW2 1035 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF251Q9BRH9 671 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 BCL2L14Q9BZR8 327 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 TINAGL1Q9GZM7 467 aaPredicted RBP7.96□□□□□ -1.14
ATG4A-202ENST00000345734 MED28Q9H204 178 aa7.96□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF391Q9UJN7 358 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms