RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 NMES1Q9C002 83 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 OR2H1Q9GZK4 316 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 TMEM100Q9NV29 134 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 ZNF319Q9P2F9 582 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 ZNF629Q9UEG4 869 aaPredicted RBP11.16□□□□□ -0.62
CLK3-201ENST00000345005 SSUH2Q9Y2M2 353 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 MYO7BQ6PIF6 2116 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 TRBV6-7A0A0A0MS04 114 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 TEX13DA0A0J9YY54 714 aaPredicted RBP11.16□□□□□ -0.62
CLK3-201ENST00000345005 OR6C6A6NF89 314 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 DUS4LO95620 317 aaKnown RBP11.16□□□□□ -0.62
CLK3-201ENST00000345005 ERCC1P07992 297 aaPredicted RBP11.16□□□□□ -0.62
CLK3-201ENST00000345005 SPINK2P20155 84 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 BDKRB2P30411 391 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 IL13RA1P78552 427 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 PSG4Q00888 419 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 SPOCK1Q08629 439 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 ACTBL2Q562R1 376 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 GLYATL3Q5SZD4 288 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 ATRAIDQ6UW56 229 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 NUFIP2Q7Z417 695 aaKnown RBP11.16□□□□□ -0.62
CLK3-201ENST00000345005 NAA40Q86UY6 237 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 SLC30A7Q8NEW0 376 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 AQP3Q92482 292 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 FAM46BQ96A09 425 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 CNTNAP3BQ96NU0 1288 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 TCEAL7Q9BRU2 100 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 OR10A2Q9H208 303 aa11.16□□□□□ -0.62
CLK3-201ENST00000345005 DOCK7Q96N67 2140 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 A0A0B4J2A0 478 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 C9orf170A2RU37 121 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 IGLV3-1P01715 115 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 HEXAP06865 529 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 CD79AP11912 226 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 PVALBP20472 110 aaPredicted RBP11.15□□□□□ -0.62
CLK3-201ENST00000345005 PSMB6P28072 239 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 CXADRP78310 365 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 PLA2G7Q13093 441 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 KRTAP27-1Q3LI81 207 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 ZNF529Q6P280 563 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 Q6ZS92 163 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 OR51A2Q8NGJ7 313 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 SAT2Q96F10 170 aaPredicted RBP11.15□□□□□ -0.62
CLK3-201ENST00000345005 GMPPAQ96IJ6 420 aaPredicted RBP11.15□□□□□ -0.62
CLK3-201ENST00000345005 FAM71F1Q96KD3 344 aaPredicted RBP11.15□□□□□ -0.62
CLK3-201ENST00000345005 SEC11CQ9BY50 192 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 TINAGL1Q9GZM7 467 aaPredicted RBP11.15□□□□□ -0.62
CLK3-201ENST00000345005 WNT5BQ9H1J7 359 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 MMP26Q9NRE1 261 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 PLSCR2Q9NRY7 297 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 SHPKQ9UHJ6 478 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 PCDHB10Q9UN67 800 aa11.15□□□□□ -0.62
CLK3-201ENST00000345005 BPNT1O95861 308 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 IFNA6P05013 189 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 DBHP09172 617 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 MMP7P09237 267 aaPredicted RBP11.14□□□□□ -0.63
CLK3-201ENST00000345005 PATE4P0C8F1 98 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 EIF2S3P41091 472 aaKnown RBP11.14□□□□□ -0.63
CLK3-201ENST00000345005 HTR5AP47898 357 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 GFOD2Q3B7J2 385 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 SCGB2B2Q4G0G5 96 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 Q6ZSR3 168 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 JAGN1Q8N5M9 183 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 DMBX1Q8NFW5 382 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 OR13C8Q8NGS7 320 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 OR14K1Q8NGZ2 314 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 AKR7LQ8NHP1 331 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 PIK3IP1Q96FE7 263 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 ZNF251Q9BRH9 671 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 CLCF1Q9UBD9 225 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 FBLN5Q9UBX5 448 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 MSRB2Q9Y3D2 182 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 MEIS3P1A6NDR6 274 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 FAM74A7A6NL05 159 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 MKRN2OSH3BPM6 223 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 M0QYG6 137 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 SS18L1O75177 396 aaPredicted RBP11.14□□□□□ -0.63
CLK3-201ENST00000345005 CHRM2P08172 466 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 PET100P0DJ07 73 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 ABOP16442 354 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 OR3A2P47893 321 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 PLEKHN1Q494U1 663 aaPredicted RBP11.14□□□□□ -0.63
CLK3-201ENST00000345005 CDNFQ49AH0 187 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 FAM74A3Q4VXF1 159 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 BAP18Q8IXM2 172 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 OR5AP2Q8NGF4 316 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 FGFBP3Q8TAT2 258 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 C10orf35Q96D05 121 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 TAAR6Q96RI8 345 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 SLC6A7Q99884 636 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 CGGBP1Q9UFW8 167 aaPredicted RBP11.14□□□□□ -0.63
CLK3-201ENST00000345005 ZNF391Q9UJN7 358 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 WASF3Q9UPY6 502 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 V9GYS6 101 aa11.14□□□□□ -0.63
CLK3-201ENST00000345005 ACACAQ13085 2346 aa11.13□□□□□ -0.63
CLK3-201ENST00000345005 E9PLN8 166 aa11.13□□□□□ -0.63
CLK3-201ENST00000345005 TAAR5O14804 337 aa11.13□□□□□ -0.63
CLK3-201ENST00000345005 DHRS3O75911 302 aa11.13□□□□□ -0.63
CLK3-201ENST00000345005 S100A9P06702 114 aaKnown RBP11.13□□□□□ -0.63
CLK3-201ENST00000345005 FCER2P06734 321 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms