RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 DUX1O43812 170 aa14.11□□□□□ -0.15
SCARB1-202ENST00000339570 JTBO76095 146 aa14.11□□□□□ -0.15
SCARB1-202ENST00000339570 CST7O76096 145 aa14.11□□□□□ -0.15
SCARB1-202ENST00000339570 PNLIPRP3Q17RR3 467 aa14.11□□□□□ -0.15
SCARB1-202ENST00000339570 C10orf91Q5T1B1 145 aa14.11□□□□□ -0.15
SCARB1-202ENST00000339570 SAT2Q96F10 170 aaPredicted RBP14.11□□□□□ -0.15
SCARB1-202ENST00000339570 OCSTAMPQ9BR26 566 aa14.11□□□□□ -0.15
SCARB1-202ENST00000339570 IGHV1OR15-9A0A0B4J2B8 117 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 H3BP45 60 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 ZNF728P0DKX0 622 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 GALNSP34059 522 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 SULT1A1P50225 295 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 NDUFA6P56556 154 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 CCL20P78556 96 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 C9orf135Q5VTT2 229 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 MYPOPQ86VE0 399 aaPredicted RBP14.1□□□□□ -0.15
SCARB1-202ENST00000339570 PLXDC1Q8IUK5 500 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 MRPL13Q9BYD1 178 aaKnown RBP14.1□□□□□ -0.15
SCARB1-202ENST00000339570 LRP4O75096 1905 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 COL6A3P12111 3177 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 GEMIN2O14893 280 aaKnown RBP14.1□□□□□ -0.15
SCARB1-202ENST00000339570 DEDDO75618 318 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 LCATP04180 440 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 CD5P06127 495 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 CSNK1A1P48729 337 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 HNRNPKP61978 463 aaKnown RBP eCLIP14.1□□□□□ -0.151e-6■■■■□ 22.7
SCARB1-202ENST00000339570 ACTBL2Q562R1 376 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 KCNIP3Q9Y2W7 256 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 ASPMQ8IZT6 3477 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 NDUFS6O75380 124 aaKnown RBP14.1□□□□□ -0.15
SCARB1-202ENST00000339570 CCR5P51681 352 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 PLPPR5Q32ZL2 321 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 COL13A1Q5TAT6 717 aaPredicted RBP14.1□□□□□ -0.15
SCARB1-202ENST00000339570 CDPF1Q6NVV7 123 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 ZNF529Q6P280 563 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 ANKRD37Q7Z713 158 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 C19orf12Q9NSK7 152 aa14.1□□□□□ -0.15
SCARB1-202ENST00000339570 PQLC2LA1A4F0 135 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 CLN5O75503 358 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 FOSL2P15408 326 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 RAB5AP20339 215 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 MDKP21741 143 aaPredicted RBP14.09□□□□□ -0.15
SCARB1-202ENST00000339570 NKAIN1Q4KMZ8 207 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 C4orf17Q53FE4 359 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 LHFPL1Q86WI0 220 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 ZNF441Q8N8Z8 693 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 KIAA2026Q5HYC2 2103 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 CACNA1DQ01668 2161 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 H7C1Q1 480 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 M0R135 149 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 IFNA4P05014 189 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 TMEM268Q5VZI3 342 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 SLC22A8Q8TCC7 542 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 ZNF799Q96GE5 643 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 KPTNQ9Y664 436 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 CPAMD8Q8IZJ3 1885 aa14.09□□□□□ -0.15
SCARB1-202ENST00000339570 DUSP1P28562 367 aa14.08□□□□□ -0.15
SCARB1-202ENST00000339570 RUNX1Q01196 453 aa14.08□□□□□ -0.15
SCARB1-202ENST00000339570 HGFACQ04756 655 aa14.08□□□□□ -0.15
SCARB1-202ENST00000339570 DEFB126Q9BYW3 111 aa14.08□□□□□ -0.15
SCARB1-202ENST00000339570 ZNF442Q9H7R0 627 aa14.08□□□□□ -0.15
SCARB1-202ENST00000339570 PNRC2Q9NPJ4 139 aaKnown RBP14.08□□□□□ -0.15
SCARB1-202ENST00000339570 P4HTMQ9NXG6 502 aa14.08□□□□□ -0.15
SCARB1-202ENST00000339570 LMO7DNF2Z398 122 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 SNCAP37840 140 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 GLP1RP43220 463 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 POLR2GP62487 172 aaKnown RBP eCLIP14.08□□□□□ -0.16
SCARB1-202ENST00000339570 ECH1Q13011 328 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 ZNF674Q2M3X9 581 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 LUZP4Q9P127 313 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 ANXA10Q9UJ72 324 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 BORCS7-ASMTA0A0B4J1R7 106 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 NPIPA2E9PIF3 369 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 NPIPA3F8WFD2 350 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 OR7C1O76099 320 aaPredicted RBP14.08□□□□□ -0.16
SCARB1-202ENST00000339570 OR2C1O95371 312 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 EPHA1P21709 976 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 MPZP25189 248 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 ZP4Q12836 540 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 FBXL14Q8N1E6 418 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 OR6S1Q8NH40 331 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 PARP11Q9NR21 331 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 DNAJB11Q9UBS4 358 aa14.08□□□□□ -0.16
SCARB1-202ENST00000339570 KNTC1P50748 2209 aa14.07□□□□□ -0.16
SCARB1-202ENST00000339570 CCDC187A0A096LP49 1063 aa14.07□□□□□ -0.16
SCARB1-202ENST00000339570 C5orf52A6NGY3 159 aa14.07□□□□□ -0.16
SCARB1-202ENST00000339570 FIGNL2A6NMB9 653 aa14.07□□□□□ -0.16
SCARB1-202ENST00000339570 MSTNO14793 375 aa14.07□□□□□ -0.16
SCARB1-202ENST00000339570 SSSCA1O60232 199 aa14.07□□□□□ -0.16
SCARB1-202ENST00000339570 LBX1P52954 281 aa14.07□□□□□ -0.16
SCARB1-202ENST00000339570 SOHLH1Q5JUK2 328 aa14.07□□□□□ -0.16
SCARB1-202ENST00000339570 SUMF2Q8NBJ7 301 aa14.07□□□□□ -0.16
SCARB1-202ENST00000339570 NEK7Q8TDX7 302 aa14.07□□□□□ -0.16
SCARB1-202ENST00000339570 ZNF501Q96CX3 271 aaPredicted RBP14.07□□□□□ -0.16
SCARB1-202ENST00000339570 ALKBH3Q96Q83 286 aaPredicted RBP14.07□□□□□ -0.16
SCARB1-202ENST00000339570 NELFAQ9H3P2 528 aa14.07□□□□□ -0.16
SCARB1-202ENST00000339570 SLC7A11Q9UPY5 501 aa14.07□□□□□ -0.16
SCARB1-202ENST00000339570 R4GN57 208 aa14.07□□□□□ -0.16
SCARB1-202ENST00000339570 SCRG1O75711 98 aa14.07□□□□□ -0.16
SCARB1-202ENST00000339570 KIAA0141Q14154 515 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms