RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 NOTCH2Q04721 2471 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 SPENQ96T58 3664 aaKnown RBP9.41□□□□□ -0.9
RTN3-201ENST00000338850 TMEM218A2RU14 115 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 MASP2O00187 686 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 CCSO14618 274 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 SOCS1O15524 211 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 NDUFA2O43678 99 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 OR2J2O76002 312 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 AGFG2O95081 481 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 HEXAP06865 529 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 ABOP16442 354 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 AMY2BP19961 511 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 IL32P24001 234 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 PAX6P26367 422 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 DSCR4P56555 118 aaPredicted RBP9.4□□□□□ -0.9
RTN3-201ENST00000338850 SOX8P57073 446 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 SUPT4H1P63272 117 aaKnown RBP9.4□□□□□ -0.9
RTN3-201ENST00000338850 RAB35Q15286 201 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 KISS1Q15726 138 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 NKAPLQ5M9Q1 402 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 FAM27BQ5VT28 67 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 IGFL3Q6UXB1 125 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 RELL2Q8NC24 303 aaPredicted RBP9.4□□□□□ -0.9
RTN3-201ENST00000338850 PAQR8Q8TEZ7 354 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 DCUN1D4Q92564 292 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 SPTSSAQ969W0 71 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 DNAJA3Q96EY1 480 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 PGAM5Q96HS1 289 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 SMIM8Q96KF7 97 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 IMMP1LQ96LU5 166 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 ZNF75AQ96N20 296 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 RTBDNQ9BSG5 229 aaPredicted RBP9.4□□□□□ -0.9
RTN3-201ENST00000338850 ZNF416Q9BWM5 594 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 C1QTNF6Q9BXI9 259 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 PECRQ9BY49 303 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 NKX6-2Q9C056 277 aaPredicted RBP9.4□□□□□ -0.9
RTN3-201ENST00000338850 RGCCQ9H4X1 137 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 ZNF552Q9H707 407 aaPredicted RBP9.4□□□□□ -0.9
RTN3-201ENST00000338850 SEC61A2Q9H9S3 476 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 ZC4H2Q9NQZ6 224 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 C1orf123Q9NWV4 160 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 ATPIF1Q9UII2 106 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 KLF2Q9Y5W3 355 aaPredicted RBP9.4□□□□□ -0.9
RTN3-201ENST00000338850 EML6Q6ZMW3 1958 aa9.4□□□□□ -0.9
RTN3-201ENST00000338850 ICE1Q9Y2F5 2266 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 DOPEY1Q5JWR5 2465 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 C5orf51A6NDU8 294 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 RER1O15258 196 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 DHHO43323 396 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 TPD52L2O43399 206 aaKnown RBP9.39□□□□□ -0.91
RTN3-201ENST00000338850 RAD51DO75771 328 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 PMP2P02689 132 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 CSTBP04080 98 aaKnown RBP9.39□□□□□ -0.91
RTN3-201ENST00000338850 CSN2P05814 226 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 PGAM2P15259 253 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 AKR1C4P17516 323 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 ATF4P18848 351 aaPredicted RBP9.39□□□□□ -0.91
RTN3-201ENST00000338850 CRYGSP22914 178 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 OR3A2P47893 321 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 MRPL49Q13405 166 aaKnown RBP9.39□□□□□ -0.91
RTN3-201ENST00000338850 ARFRP1Q13795 201 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 ESPL1Q14674 2120 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 CNN3Q15417 329 aaKnown RBP9.39□□□□□ -0.91
RTN3-201ENST00000338850 OR8B8Q15620 311 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 SGCAQ16586 387 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 NRN1LQ496H8 165 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 SLC22A6Q4U2R8 563 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 PDSS1Q5T2R2 415 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 PLXDC2Q6UX71 529 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 C16orf47Q6ZP98 133 aaPredicted RBP9.39□□□□□ -0.91
RTN3-201ENST00000338850 FAM57BQ71RH2 274 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 GPR137CQ8N3F9 429 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 COMMD1Q8N668 190 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 LRTM2Q8N967 370 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 ZSCAN4Q8NAM6 433 aaPredicted RBP9.39□□□□□ -0.91
RTN3-201ENST00000338850 BPIFCQ8NFQ6 507 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 OR13G1Q8NGZ3 307 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 SNRNP40Q96DI7 357 aaKnown RBP9.39□□□□□ -0.91
RTN3-201ENST00000338850 GALNT14Q96FL9 552 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 LRRC46Q96FV0 321 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 ARHGAP5-AS1Q96IT6 56 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 Q96M66 194 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 GPER1Q99527 375 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 NKX3-1Q99801 234 aaPredicted RBP9.39□□□□□ -0.91
RTN3-201ENST00000338850 SEC11CQ9BY50 192 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 SLC5A7Q9GZV3 580 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 ZNF319Q9P2F9 582 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 C14orf166Q9Y224 244 aaKnown RBP9.39□□□□□ -0.91
RTN3-201ENST00000338850 PRELID1Q9Y255 219 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 MRPS18CQ9Y3D5 142 aaKnown RBP9.39□□□□□ -0.91
RTN3-201ENST00000338850 TEX15Q9BXT5 2789 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 HIVEP3Q5T1R4 2406 aa9.39□□□□□ -0.91
RTN3-201ENST00000338850 IGHV1-45A0A0A0MS14 117 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 ZNF814B7Z6K7 855 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 EEF1E1-BLOC1S5C9J1V9 151 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 H0YIZ8 118 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 TSPAN4O14817 238 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 CRTAPO75718 401 aaPredicted RBP9.38□□□□□ -0.91
RTN3-201ENST00000338850 APOC3P02656 99 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 HPNP05981 417 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms