RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 PLCXD3Q63HM9 321 aa16.43■□□□□ 0.22
RFTN1-201ENST00000334133 PEG10Q86TG7 708 aaKnown RBP16.43■□□□□ 0.22
RFTN1-201ENST00000334133 ZBTB44Q8NCP5 570 aa16.43■□□□□ 0.22
RFTN1-201ENST00000334133 ZNF850A8MQ14 1090 aa16.42■□□□□ 0.22
RFTN1-201ENST00000334133 HLA-HP01893 362 aa16.42■□□□□ 0.22
RFTN1-201ENST00000334133 HOXD4P09016 255 aaPredicted RBP16.42■□□□□ 0.22
RFTN1-201ENST00000334133 EDN3P14138 238 aa16.42■□□□□ 0.22
RFTN1-201ENST00000334133 RPS2P15880 293 aaKnown RBP16.42■□□□□ 0.22
RFTN1-201ENST00000334133 SNTB1Q13884 538 aaKnown RBP16.42■□□□□ 0.22
RFTN1-201ENST00000334133 FAM189A2Q15884 450 aa16.42■□□□□ 0.22
RFTN1-201ENST00000334133 ABLIM2Q6H8Q1 611 aa16.42■□□□□ 0.22
RFTN1-201ENST00000334133 ATRAIDQ6UW56 229 aa16.42■□□□□ 0.22
RFTN1-201ENST00000334133 TUSC5Q8IXB3 177 aa16.42■□□□□ 0.22
RFTN1-201ENST00000334133 FNDC9Q8TBE3 224 aa16.42■□□□□ 0.22
RFTN1-201ENST00000334133 MRPS24Q96EL2 167 aaKnown RBP16.42■□□□□ 0.22
RFTN1-201ENST00000334133 TAAR9Q96RI9 348 aa16.42■□□□□ 0.22
RFTN1-201ENST00000334133 ARPC5LQ9BPX5 153 aa16.42■□□□□ 0.22
RFTN1-201ENST00000334133 STRADBQ9C0K7 418 aa16.42■□□□□ 0.22
RFTN1-201ENST00000334133 ZNF629Q9UEG4 869 aaPredicted RBP16.42■□□□□ 0.22
RFTN1-201ENST00000334133 MRPL33O75394 65 aaKnown RBP16.42■□□□□ 0.22
RFTN1-201ENST00000334133 CALHM1Q8IU99 346 aa16.42■□□□□ 0.22
RFTN1-201ENST00000334133 SULF2Q8IWU5 870 aa16.42■□□□□ 0.22
RFTN1-201ENST00000334133 MARS2Q96GW9 593 aaKnown RBP16.42■□□□□ 0.22
RFTN1-201ENST00000334133 CMSS1Q9BQ75 279 aaKnown RBP16.42■□□□□ 0.22
RFTN1-201ENST00000334133 ASF1BQ9NVP2 202 aa16.42■□□□□ 0.22
RFTN1-201ENST00000334133 CRIM1Q9NZV1 1036 aa16.42■□□□□ 0.22
RFTN1-201ENST00000334133 H3F3CQ6NXT2 135 aa16.41■□□□□ 0.22
RFTN1-201ENST00000334133 TMED6Q8WW62 240 aa16.41■□□□□ 0.22
RFTN1-201ENST00000334133 SLC25A32Q9H2D1 315 aa16.41■□□□□ 0.22
RFTN1-201ENST00000334133 IL17BQ9UHF5 180 aa16.41■□□□□ 0.22
RFTN1-201ENST00000334133 ZFHX4Q86UP3 3567 aa16.41■□□□□ 0.22
RFTN1-201ENST00000334133 BOD1L1Q8NFC6 3051 aa16.41■□□□□ 0.22
RFTN1-201ENST00000334133 TEX13DA0A0J9YY54 714 aaPredicted RBP16.41■□□□□ 0.22
RFTN1-201ENST00000334133 OR5H8P0DN80 308 aa16.41■□□□□ 0.22
RFTN1-201ENST00000334133 CNR1P21554 472 aa16.41■□□□□ 0.22
RFTN1-201ENST00000334133 ARF1P84077 181 aaKnown RBP16.41■□□□□ 0.22
RFTN1-201ENST00000334133 ABHD17BQ5VST6 288 aa16.41■□□□□ 0.22
RFTN1-201ENST00000334133 OR2M7Q8NG81 312 aa16.41■□□□□ 0.22
RFTN1-201ENST00000334133 OR10AD1Q8NGE0 317 aa16.41■□□□□ 0.22
RFTN1-201ENST00000334133 OR51B6Q9H340 312 aa16.41■□□□□ 0.22
RFTN1-201ENST00000334133 C14orf166Q9Y224 244 aaKnown RBP16.41■□□□□ 0.22
RFTN1-201ENST00000334133 R4GN57 208 aa16.41■□□□□ 0.22
RFTN1-201ENST00000334133 NPBWR2P48146 333 aa16.41■□□□□ 0.22
RFTN1-201ENST00000334133 PPIAP62937 165 aaKnown RBP16.41■□□□□ 0.22
RFTN1-201ENST00000334133 OR1S2Q8NGQ3 325 aa16.41■□□□□ 0.22
RFTN1-201ENST00000334133 BARX1Q9HBU1 254 aaPredicted RBP16.41■□□□□ 0.22
RFTN1-201ENST00000334133 ANXA10Q9UJ72 324 aa16.41■□□□□ 0.22
RFTN1-201ENST00000334133 ST3GAL6Q9Y274 331 aa16.41■□□□□ 0.22
RFTN1-201ENST00000334133 DNPH1O43598 174 aa16.4■□□□□ 0.22
RFTN1-201ENST00000334133 DHRS13Q6UX07 377 aa16.4■□□□□ 0.22
RFTN1-201ENST00000334133 VASH2Q86V25 355 aa16.4■□□□□ 0.22
RFTN1-201ENST00000334133 CPNE4Q96A23 557 aaPredicted RBP16.4■□□□□ 0.22
RFTN1-201ENST00000334133 SPSB1Q96BD6 273 aa16.4■□□□□ 0.22
RFTN1-201ENST00000334133 NMES1Q9C002 83 aa16.4■□□□□ 0.22
RFTN1-201ENST00000334133 ZNF503-AS2A6NEH8 195 aa16.4■□□□□ 0.22
RFTN1-201ENST00000334133 CEACAM18A8MTB9 384 aa16.4■□□□□ 0.22
RFTN1-201ENST00000334133 CYTIPO60759 359 aa16.4■□□□□ 0.22
RFTN1-201ENST00000334133 CNN3Q15417 329 aaKnown RBP16.4■□□□□ 0.22
RFTN1-201ENST00000334133 PAN3Q58A45 887 aaKnown RBP16.4■□□□□ 0.22
RFTN1-201ENST00000334133 ATP1A1-AS1Q5TC04 95 aa16.4■□□□□ 0.22
RFTN1-201ENST00000334133 PIK3IP1Q96FE7 263 aa16.4■□□□□ 0.22
RFTN1-201ENST00000334133 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.4■□□□□ 0.22
RFTN1-201ENST00000334133 MED9Q9NWA0 146 aa16.4■□□□□ 0.22
RFTN1-201ENST00000334133 BOKQ9UMX3 212 aaPredicted RBP16.4■□□□□ 0.22
RFTN1-201ENST00000334133 CACNA1HO95180 2353 aa16.4■□□□□ 0.22
RFTN1-201ENST00000334133 hCG_38984A0A1B0GV85 526 aa16.39■□□□□ 0.21
RFTN1-201ENST00000334133 PHLDA2Q53GA4 152 aa16.39■□□□□ 0.21
RFTN1-201ENST00000334133 CLEC9AQ6UXN8 241 aa16.39■□□□□ 0.21
RFTN1-201ENST00000334133 COL27A1Q8IZC6 1860 aaPredicted RBP16.39■□□□□ 0.21
RFTN1-201ENST00000334133 RAB18Q9NP72 206 aa16.39■□□□□ 0.21
RFTN1-201ENST00000334133 LOC105371267A0A1B0GV96 52 aa16.39■□□□□ 0.21
RFTN1-201ENST00000334133 DEFA5Q01523 94 aa16.39■□□□□ 0.21
RFTN1-201ENST00000334133 OR1C1Q15619 314 aa16.39■□□□□ 0.21
RFTN1-201ENST00000334133 SLC25A26Q70HW3 274 aa16.39■□□□□ 0.21
RFTN1-201ENST00000334133 WNT2BQ93097 391 aa16.39■□□□□ 0.21
RFTN1-201ENST00000334133 SCGB3A2Q96PL1 93 aa16.39■□□□□ 0.21
RFTN1-201ENST00000334133 PCDHB10Q9UN67 800 aa16.39■□□□□ 0.21
RFTN1-201ENST00000334133 HSPB6O14558 160 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 SCGB1D2O95969 90 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 M6PRP20645 277 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 ZNF585AQ6P3V2 769 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 Q6ZSR3 168 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 HSD17B13Q7Z5P4 300 aaPredicted RBP16.38■□□□□ 0.21
RFTN1-201ENST00000334133 ZNF703Q9H7S9 590 aaPredicted RBP16.38■□□□□ 0.21
RFTN1-201ENST00000334133 C5orf49A4QMS7 147 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 KRBOX1C9JBD0 128 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 OR7C1O76099 320 aaPredicted RBP16.38■□□□□ 0.21
RFTN1-201ENST00000334133 MMP7P09237 267 aaPredicted RBP16.38■□□□□ 0.21
RFTN1-201ENST00000334133 PRKACBP22694 351 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 NOVA1P51513 510 aaKnown RBP16.38■□□□□ 0.21
RFTN1-201ENST00000334133 IGFBP7Q16270 282 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 IAH1Q2TAA2 248 aaPredicted RBP16.38■□□□□ 0.21
RFTN1-201ENST00000334133 SMUG1Q53HV7 270 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 SLC22A25Q6T423 547 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 BPIFCQ8NFQ6 507 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 HS3ST6Q96QI5 342 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 PRRG4Q9BZD6 226 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 ZC4H2Q9NQZ6 224 aa16.38■□□□□ 0.21
RFTN1-201ENST00000334133 FARS2O95363 451 aaKnown RBP16.38■□□□□ 0.21
RFTN1-201ENST00000334133 FCGR3AP08637 254 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms