RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 A0A1W2PRF3 423 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 A0A1W2PRM7 423 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 FBP1P09467 338 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 HOXC13P31276 330 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 MRM1Q6IN84 353 aaKnown RBP7.1□□□□□ -1.27
CIITA-201ENST00000324288 FDX2Q6P4F2 183 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 SCGB1D4Q6XE38 83 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 STAC2Q6ZMT1 411 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 OR52L2PQ8NGH6 319 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 UBTD2Q8WUN7 234 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 SIRT5Q9NXA8 310 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 KCND3Q9UK17 655 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 TIMM10BQ9Y5J6 103 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 CXorf65A6NEN9 183 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 FGF17O60258 216 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 IL5P05113 134 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 ADAT1Q9BUB4 502 aaKnown RBP7.1□□□□□ -1.27
CIITA-201ENST00000324288 MT-ATP6P00846 226 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 AGERQ15109 404 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 OR2Z1Q8NG97 314 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 OR2T10Q8NGZ9 312 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 HGDQ93099 445 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 EVA1AQ9H8M9 152 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 LOC389332A0A1B0GUA5 103 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 SLC22A20A6NK97 555 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 CDC14BO60729 498 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 EXT1Q16394 746 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 CTF1Q16619 201 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 NUBPLQ8TB37 319 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 TMEM208Q9BTX3 173 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 PARD6GQ9BYG4 376 aaPredicted RBP7.1□□□□□ -1.27
CIITA-201ENST00000324288 HS3ST2Q9Y278 367 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 CYR61O00622 381 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 RHBDL1O75783 438 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 KLKB1P03952 638 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 APOBEC1P41238 236 aaKnown RBP7.1□□□□□ -1.27
CIITA-201ENST00000324288 ZNF137PP52743 207 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 GABRA6Q16445 453 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 GLDNQ6ZMI3 551 aaPredicted RBP7.1□□□□□ -1.27
CIITA-201ENST00000324288 LHFPL2Q6ZUX7 228 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 ADPRHL1Q8NDY3 354 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 TMEM9BQ9NQ34 198 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 TTC28Q96AY4 2481 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 FCGR3BO75015 233 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 SLC37A1P57057 533 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 HES3Q5TGS1 186 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 NPAS1Q99742 590 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 ABLIM3O94929 683 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 SLC25A5P05141 298 aaKnown RBP7.1□□□□□ -1.27
CIITA-201ENST00000324288 NPPBP16860 134 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 RPS23P62266 143 aaKnown RBP7.1□□□□□ -1.27
CIITA-201ENST00000324288 RHOBP62745 196 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 TIAL1Q01085 375 aaKnown RBP eCLIP7.1□□□□□ -1.27
CIITA-201ENST00000324288 OR4A4PQ8NGN8 299 aa7.1□□□□□ -1.27
CIITA-201ENST00000324288 DOCK4Q8N1I0 1966 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 IER3P46695 156 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 PPP1R1AQ13522 171 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 ZNF880Q6PDB4 577 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 RAB37Q96AX2 223 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 TP53RKQ96S44 253 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 PDLIM7Q9NR12 457 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 CDRT15L2A8MXV6 281 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 RGS13O14921 159 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 ARR3P36575 388 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 CLDN15P56746 228 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 GSG1Q2KHT4 349 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 TMEM229BQ8NBD8 167 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 ARHGAP5-AS1Q96IT6 56 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 M0QZ24 198 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 TNFSF15O95150 251 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 ACTL6AO96019 429 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 PRSS1P07477 247 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 KMT5CQ86Y97 462 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 FUT9Q9Y231 359 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 ST3GAL6Q9Y274 331 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 DIO1P49895 249 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 TGIF2LYQ8IUE0 185 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 PACRGQ96M98 296 aaPredicted RBP7.09□□□□□ -1.27
CIITA-201ENST00000324288 SIGLEC11Q96RL6 698 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 CMC2Q9NRP2 79 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 ICAM5Q9UMF0 924 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 F11RQ9Y624 299 aaKnown RBP7.09□□□□□ -1.27
CIITA-201ENST00000324288 BCL3P20749 454 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 MPV17LQ2QL34 196 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 ST6GALNAC3Q8NDV1 305 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 C16orf52Q8NHV5 167 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 WFIKKN1Q96NZ8 548 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 APELAP0DMC3 54 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 SSX1Q16384 188 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 SIRT7Q9NRC8 400 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 TECRQ9NZ01 308 aaKnown RBP7.09□□□□□ -1.27
CIITA-201ENST00000324288 FAM90A27PA6NNH2 459 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 ZBTB42B2RXF5 422 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 SLCO2B1O94956 709 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 FAM87AP0C7U9 286 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 CCDC190Q86UF4 302 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 NEIL1Q96FI4 390 aaPredicted RBP7.09□□□□□ -1.27
CIITA-201ENST00000324288 OR10C1Q96KK4 312 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 FGF22Q9HCT0 170 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 ZNF391Q9UJN7 358 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms