RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 OR10D3Q8NH80 312 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 ABHD3Q8WU67 409 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 C1orf123Q9NWV4 160 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 NRASP01111 189 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 RBP2P50120 134 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 PIGPP57054 158 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 PSG4Q00888 419 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 RAB35Q15286 201 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 FAM122CQ6P4D5 195 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 TMEM38BQ9NVV0 291 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 LHX6Q9UPM6 363 aa15.15■□□□□ 0.02
COL9A1-201ENST00000320755 CRYGSP22914 178 aa15.14■□□□□ 0.01
COL9A1-201ENST00000320755 ID4P47928 161 aa15.14■□□□□ 0.01
COL9A1-201ENST00000320755 Q0VFX4 171 aa15.14■□□□□ 0.01
COL9A1-201ENST00000320755 FOXL2NBQ6ZUU3 175 aa15.14■□□□□ 0.01
COL9A1-201ENST00000320755 OR4A4PQ8NGN8 299 aa15.14■□□□□ 0.01
COL9A1-201ENST00000320755 TLNRD1Q9H1K6 362 aa15.14■□□□□ 0.01
COL9A1-201ENST00000320755 TAF9BQ9HBM6 251 aa15.14■□□□□ 0.01
COL9A1-201ENST00000320755 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.14■□□□□ 0.01
COL9A1-201ENST00000320755 MEMO1Q9Y316 297 aa15.14■□□□□ 0.01
COL9A1-201ENST00000320755 GJE1A6NN92 205 aa15.14■□□□□ 0.01
COL9A1-201ENST00000320755 FARS2O95363 451 aaKnown RBP15.14■□□□□ 0.01
COL9A1-201ENST00000320755 FAM157CP0CG43 387 aa15.14■□□□□ 0.01
COL9A1-201ENST00000320755 B3GALT5-AS1P59052 145 aa15.14■□□□□ 0.01
COL9A1-201ENST00000320755 ZNF92Q03936 586 aa15.14■□□□□ 0.01
COL9A1-201ENST00000320755 ABCA11PQ4W5N1 156 aa15.14■□□□□ 0.01
COL9A1-201ENST00000320755 CBLN2Q8IUK8 224 aa15.14■□□□□ 0.01
COL9A1-201ENST00000320755 SLC5A7Q9GZV3 580 aa15.14■□□□□ 0.01
COL9A1-201ENST00000320755 SH2D2AQ9NP31 389 aa15.14■□□□□ 0.01
COL9A1-201ENST00000320755 ZNF629Q9UEG4 869 aaPredicted RBP15.14■□□□□ 0.01
COL9A1-201ENST00000320755 NCKAP5O14513 1909 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 RAB19A4D1S5 217 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 MED6O75586 246 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 PET100P0DJ07 73 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 ZNF708P17019 499 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 SPINK2P20155 84 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 GDF1P27539 372 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 GGNBP1Q5YKI7 109 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 CNTNAP3BQ96NU0 1288 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 FOXB1Q99853 325 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 IGKV1-12A0A0C4DH73 117 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 K7EPK0 472 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 DIRAS3O95661 229 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 IFNA21P01568 189 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 IGKV1D-12P01611 117 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 CD79AP11912 226 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 AKIRIN2Q53H80 203 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 H3F3CQ6NXT2 135 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 FAM71E2Q8N5Q1 922 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 INTS12Q96CB8 462 aaKnown RBP15.13■□□□□ 0.01
COL9A1-201ENST00000320755 MARS2Q96GW9 593 aaKnown RBP15.13■□□□□ 0.01
COL9A1-201ENST00000320755 AQP10Q96PS8 301 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 PCDHB16Q9NRJ7 776 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 NTN3O00634 580 aaPredicted RBP15.13■□□□□ 0.01
COL9A1-201ENST00000320755 ICAM2P13598 275 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 RPL12P30050 165 aaKnown RBP15.13■□□□□ 0.01
COL9A1-201ENST00000320755 ZNF133P52736 654 aaPredicted RBP15.13■□□□□ 0.01
COL9A1-201ENST00000320755 NAAAQ02083 359 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 ZFP36L1Q07352 338 aaKnown RBP15.13■□□□□ 0.01
COL9A1-201ENST00000320755 SPEM2Q0P670 501 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 SCRN3Q0VDG4 424 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 ARL6IP1Q15041 203 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 SLC23A3Q6PIS1 610 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 GGNQ86UU5 652 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 OR5L1Q8NGL2 311 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 SGCZQ96LD1 299 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 DEPPQ9NTK1 212 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 ST3GAL6Q9Y274 331 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 DOCK10Q96BY6 2186 aa15.13■□□□□ 0.01
COL9A1-201ENST00000320755 HKR1P10072 659 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 CCL2P13500 99 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 CTRB1P17538 263 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 PLCXD3Q63HM9 321 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 CTRB2Q6GPI1 263 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 SPINK14Q6IE38 97 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 SLC22A25Q6T423 547 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 LDLRAD3Q86YD5 345 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 SKA3Q8IX90 412 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 CLRN3Q8NCR9 226 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 OR10AD1Q8NGE0 317 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 SPSB1Q96BD6 273 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 CNTNAP3Q9BZ76 1288 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 LPAR3Q9UBY5 353 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 OR5AC1P0C628 307 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 ZNF728P0DKX0 622 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 SRD5A2P31213 254 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 FCGR2CP31995 323 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 SMCO1Q147U7 214 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 CNN3Q15417 329 aaKnown RBP15.12■□□□□ 0.01
COL9A1-201ENST00000320755 HAGHLQ6PII5 290 aaPredicted RBP15.12■□□□□ 0.01
COL9A1-201ENST00000320755 UQCC3Q6UW78 93 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 C5orf24Q7Z6I8 188 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 SVBPQ8N300 66 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 RHBDD1Q8TEB9 315 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 TMEM100Q9NV29 134 aa15.12■□□□□ 0.01
COL9A1-201ENST00000320755 A0A096LPE4 126 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 A0A1W2PPZ6 126 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 PINLYPA6NC86 204 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 ZNF716A6NP11 495 aa15.11■□□□□ 0.01
COL9A1-201ENST00000320755 XRCC2O43543 280 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms