RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 NPSR1Q6W5P4 371 aa6.68□□□□□ -1.34
CDHR3-201ENST00000317716 BAGE3Q86Y29 109 aa6.68□□□□□ -1.34
CDHR3-201ENST00000317716 BAGE2Q86Y30 109 aa6.68□□□□□ -1.34
CDHR3-201ENST00000317716 BMPERQ8N8U9 685 aa6.68□□□□□ -1.34
CDHR3-201ENST00000317716 CCDC54Q8NEL0 328 aa6.68□□□□□ -1.34
CDHR3-201ENST00000317716 ERGIC1Q969X5 290 aa6.68□□□□□ -1.34
CDHR3-201ENST00000317716 SAT2Q96F10 170 aaPredicted RBP6.68□□□□□ -1.34
CDHR3-201ENST00000317716 CCDC74BQ96LY2 380 aa6.68□□□□□ -1.34
CDHR3-201ENST00000317716 SLC25A31Q9H0C2 315 aa6.68□□□□□ -1.34
CDHR3-201ENST00000317716 BCO1Q9HAY6 547 aa6.68□□□□□ -1.34
CDHR3-201ENST00000317716 GCM1Q9NP62 436 aa6.68□□□□□ -1.34
CDHR3-201ENST00000317716 RAB18Q9NP72 206 aa6.68□□□□□ -1.34
CDHR3-201ENST00000317716 CBLN4Q9NTU7 201 aa6.68□□□□□ -1.34
CDHR3-201ENST00000317716 SERTAD4Q9NUC0 356 aa6.68□□□□□ -1.34
CDHR3-201ENST00000317716 DNAJB11Q9UBS4 358 aa6.68□□□□□ -1.34
CDHR3-201ENST00000317716 SERTAD3Q9UJW9 196 aa6.68□□□□□ -1.34
CDHR3-201ENST00000317716 SEC14L6B5MCN3 397 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 H0YIZ8 118 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 ZNF749O43361 778 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 CLDN1O95832 211 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 DDAH2O95865 285 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 IGHG1P01857 330 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 CHRNA7P36544 502 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 PPICP45877 212 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 POLR2HP52434 150 aaKnown RBP6.67□□□□□ -1.34
CDHR3-201ENST00000317716 RAB1AP62820 205 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 HSF1Q00613 529 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 ZNF117Q03924 483 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 MALLQ13021 153 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 UBE2V2Q15819 145 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 ZNF787Q6DD87 383 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 SLC38A9Q8NBW4 561 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 OR2AE1Q8NHA4 323 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 MRGPRX1Q96LB2 322 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 CALHM2Q9HA72 323 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 ZNF286AQ9HBT8 521 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 RBFOX3A6NFN3 312 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 H0Y8G0 127 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 CD74P04233 296 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 CISD3P0C7P0 127 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 PHF19Q5T6S3 580 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 C19orf47Q8N9M1 422 aaKnown RBP6.67□□□□□ -1.34
CDHR3-201ENST00000317716 OR4F5Q8NH21 305 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 LHX4Q969G2 390 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 OR4F4Q96R69 305 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 AUP1Q9Y679 476 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 ARHGEF17Q96PE2 2063 aaPredicted RBP6.67□□□□□ -1.34
CDHR3-201ENST00000317716 AQP7O14520 342 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 RAMP1O60894 148 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 TK1P04183 234 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 CELA2BP08218 269 aaPredicted RBP6.67□□□□□ -1.34
CDHR3-201ENST00000317716 SNRPCP09234 159 aaKnown RBP6.67□□□□□ -1.34
CDHR3-201ENST00000317716 PRF1P14222 555 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 IL11P20809 199 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 FPR2P25090 351 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 CSNK1A1P48729 337 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 GFERP55789 205 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 MFAP5Q13361 173 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 DDIT4LQ96D03 193 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 PRO3102Q9H379 93 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 TXNIPQ9H3M7 391 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 LYRM4Q9HD34 91 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 TMEM184BQ9Y519 407 aaPredicted RBP6.67□□□□□ -1.34
CDHR3-201ENST00000317716 RFNGQ9Y644 331 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 CHD8Q9HCK8 2581 aa6.67□□□□□ -1.34
CDHR3-201ENST00000317716 HEATR1Q9H583 2144 aaKnown RBP6.67□□□□□ -1.34
CDHR3-201ENST00000317716 K7EQS6 105 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 BPNT1O95861 308 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 NTF3P20783 257 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 CD200P41217 278 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 PCP4P48539 62 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 LINC01590Q5TEZ4 76 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 AADACL3Q5VUY0 350 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 UNQ9370/PRO34162Q6UXP9 181 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 ARRDC1Q8N5I2 433 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 OR13D1Q8NGV5 346 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 OR11L1Q8NGX0 322 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 SNIP1Q8TAD8 396 aaKnown RBP6.66□□□□□ -1.34
CDHR3-201ENST00000317716 TIMP4Q99727 224 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 DEFB126Q9BYW3 111 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 METTL9Q9H1A3 318 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 PLEKHA2Q9HB19 425 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 V9GYS6 101 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 CFAP54Q96N23 3096 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 C2orf16Q68DN1 1984 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 DOCK4Q8N1I0 1966 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 COLCA2A8K830 154 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 C9JQL5 133 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 PAX6P26367 422 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 DRD3P35462 400 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 BLKP51451 505 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 SLC25A1P53007 311 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 KRTDAPP60985 99 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 RNF4P78317 190 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 SRYQ05066 204 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 SPNS3Q6ZMD2 512 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 ZNF595Q8IYB9 648 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 LFNGQ8NES3 379 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 BTF3L4Q96K17 158 aa6.66□□□□□ -1.34
CDHR3-201ENST00000317716 SOX7Q9BT81 388 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms