RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 CNTRLQ7Z7A1 2325 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 A0A1B0GV90 55 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 ZNF727A8MUV8 499 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 LMO7DNF2Z398 122 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 RRP8O43159 456 aaKnown RBP11.75□□□□□ -0.53
SKA3-202ENST00000314759 IGLV3-1P01715 115 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 EN2P19622 333 aaPredicted RBP11.75□□□□□ -0.53
SKA3-202ENST00000314759 GABRR1P24046 479 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 SP6Q3SY56 376 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 SLC25A53Q5H9E4 307 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 HEPN1Q6WQI6 88 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 ZNF574Q6ZN55 896 aaPredicted RBP11.75□□□□□ -0.53
SKA3-202ENST00000314759 SLAMF9Q96A28 289 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 YPEL4Q96NS1 127 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 PLEKHJ1Q9NW61 149 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 PUS1Q9Y606 427 aaKnown RBP eCLIP11.75□□□□□ -0.53
SKA3-202ENST00000314759 F5H5K5 113 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 H7C1Q1 480 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 ZNF205O95201 554 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 OR2C1O95371 312 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 IFNA17P01571 189 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 SEC11BP0C7V7 166 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 ZNF43P17038 809 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 ECI1P42126 302 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 RSPO4Q2I0M5 234 aaPredicted RBP11.75□□□□□ -0.53
SKA3-202ENST00000314759 RPUSD3Q6P087 351 aaKnown RBP11.75□□□□□ -0.53
SKA3-202ENST00000314759 TMEM156Q8N614 296 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 KDF1Q8NAX2 398 aaPredicted RBP11.75□□□□□ -0.53
SKA3-202ENST00000314759 ADPRHL1Q8NDY3 354 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 OR1J1Q8NGS3 322 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 MR1Q95460 341 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 PIGTQ969N2 578 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 JSRP1Q96MG2 331 aaPredicted RBP11.75□□□□□ -0.53
SKA3-202ENST00000314759 S100A13Q99584 98 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 FGF21Q9NSA1 209 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 HDGFL3Q9Y3E1 203 aa11.75□□□□□ -0.53
SKA3-202ENST00000314759 CA11O75493 328 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 ITGA3P26006 1051 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 PTGDSP41222 190 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 PIGPP57054 158 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 ANKRD37Q7Z713 158 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 COMMD1Q8N668 190 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 RNF138Q8WVD3 245 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 ZNF501Q96CX3 271 aaPredicted RBP11.74□□□□□ -0.53
SKA3-202ENST00000314759 RARRES2Q99969 163 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 CHST5Q9GZS9 411 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 CEP290O15078 2479 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 CFAP54Q96N23 3096 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 IGHV1OR15-9A0A0B4J2B8 117 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 E5RGE8 158 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 DIRAS3O95661 229 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 OR5H8P0DN80 308 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 CTSSP25774 331 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 CAMLGP49069 296 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 RRADP55042 308 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 PLXDC1Q8IUK5 500 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 DMRTC2Q8IXT2 367 aaPredicted RBP11.74□□□□□ -0.53
SKA3-202ENST00000314759 LILRB2Q8N423 598 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 HAS2Q92819 552 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 C14orf144Q96I85 54 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 OXGR1Q96P68 337 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 ZNF160Q9HCG1 818 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 KCNJ16Q9NPI9 418 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 ANXA10Q9UJ72 324 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 NSG2Q9Y328 171 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 SDK1Q7Z5N4 2213 aa11.74□□□□□ -0.53
SKA3-202ENST00000314759 TRBV11-1A0A0K0K1C0 115 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 ZNF726A6NNF4 738 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 XRCC2O43543 280 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 DHRS3O75911 302 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 TMEM225BP0DP42 221 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 MYF5P13349 255 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 SFTPDP35247 375 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 CDX1P47902 265 aaPredicted RBP11.73□□□□□ -0.53
SKA3-202ENST00000314759 ARL6IP1Q15041 203 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 PPA1Q15181 289 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 RHEBQ15382 184 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 UNQ6494/PRO21346Q6UXR6 183 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 OR10G3Q8NGC4 313 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 PIGQQ9BRB3 760 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 GINS3Q9BRX5 216 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 C19orf12Q9NSK7 152 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 ZNF581Q9P0T4 197 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 DOK5Q9P104 306 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 LUZP4Q9P127 313 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 PIGLQ9Y2B2 252 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 RFNGQ9Y644 331 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 V9GYS6 101 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 OR5AC1P0C628 307 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 PPP1CCP36873 323 aaKnown RBP11.73□□□□□ -0.53
SKA3-202ENST00000314759 EIF3IQ13347 325 aaKnown RBP11.73□□□□□ -0.53
SKA3-202ENST00000314759 COL19A1Q14993 1142 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 RSPO1Q2MKA7 263 aaPredicted RBP11.73□□□□□ -0.53
SKA3-202ENST00000314759 GFI1BQ5VTD9 330 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 ZNF343Q6P1L6 599 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 LYZL2Q7Z4W2 148 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 SLC38A9Q8NBW4 561 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 TOMM40LQ969M1 308 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 FAAP24Q9BTP7 215 aa11.73□□□□□ -0.53
SKA3-202ENST00000314759 SLC35B3Q9H1N7 401 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms