RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 ESCO2Q56NI9 601 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 TOR2AQ5JU69 321 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 NUFIP2Q7Z417 695 aaKnown RBP8.09□□□□□ -1.11
PRDM9-201ENST00000296682 GGNQ86UU5 652 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 CPEB3Q8NE35 698 aaKnown RBP8.09□□□□□ -1.11
PRDM9-201ENST00000296682 ASB13Q8WXK3 278 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 AQP3Q92482 292 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 TRIB1Q96RU8 372 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 PECRQ9BY49 303 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 OR6C65A6NJZ3 312 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 DHRS7CA6NNS2 312 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 LEUTXA8MZ59 168 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 SULT1C2O00338 296 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 FCGR2CP31995 323 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 APLNRP35414 380 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 SOX8P57073 446 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 RSPO1Q2MKA7 263 aaPredicted RBP8.09□□□□□ -1.11
PRDM9-201ENST00000296682 ZNF585AQ6P3V2 769 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 VHLLQ6RSH7 139 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 DRAM2Q6UX65 266 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 CDH26Q8IXH8 852 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 SPICQ8N5J4 248 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 ZNF611Q8N823 705 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 ASF1BQ9NVP2 202 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 STARD10Q9Y365 291 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 SPEF1Q9Y4P9 236 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 TMEM14DPA8MWL7 114 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 ZNF732B4DXR9 585 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 GP1BAP07359 652 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 NAT1P18440 290 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 UBE2NP61088 152 aaKnown RBP8.09□□□□□ -1.11
PRDM9-201ENST00000296682 IAH1Q2TAA2 248 aaPredicted RBP8.09□□□□□ -1.11
PRDM9-201ENST00000296682 PDZD9Q8IXQ8 264 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 PP6455Q8WZ26 134 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 NABP1Q96AH0 204 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 PLPPR2Q96GM1 343 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 UFSP2Q9NUQ7 469 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 hCG_1807616A0A1W2PRN6 198 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 XRCC2O43543 280 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 CA6P23280 308 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 OMGP23515 440 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 THBS4P35443 961 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 AIMP2Q13155 320 aaKnown RBP8.08□□□□□ -1.12
PRDM9-201ENST00000296682 CLN3Q13286 438 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 HIST3H3Q16695 136 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 ALKBH6Q3KRA9 238 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 ZNF766Q5HY98 468 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 HAS2Q92819 552 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 CHST5Q9GZS9 411 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 WNT5BQ9H1J7 359 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 IL36RNQ9UBH0 155 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 IGF2RP11717 2491 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 OR14I1A6ND48 311 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 OR2A4O95047 310 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 RAB6AP20340 208 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 NOVA1P51513 510 aaKnown RBP8.08□□□□□ -1.12
PRDM9-201ENST00000296682 RPS27AP62979 156 aaKnown RBP8.08□□□□□ -1.12
PRDM9-201ENST00000296682 BTN1A1Q13410 526 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 LTC4SQ16873 150 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 CLEC18BQ6UXF7 455 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 CALHM1Q8IU99 346 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 SGPP2Q8IWX5 399 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 TMEM185AQ8NFB2 350 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 TMED6Q8WW62 240 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 OR2A7Q96R45 310 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 WDR13Q9H1Z4 485 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 B3GNT2Q9NY97 397 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 AK3Q9UIJ7 227 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 ANAPC10Q9UM13 185 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 ATRXP46100 2492 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 TRGV5A0A0B4J1U4 118 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 PLSCR5A0PG75 271 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 ZNF716A6NP11 495 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 EFSO43281 561 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 WISP2O76076 250 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 AGFG2O95081 481 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 IFNA21P01568 189 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 SP1P08047 785 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 HOXC12P31275 282 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 GLP1RP43220 463 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 CEBPGP53567 150 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 P2RX3P56373 397 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 SMCO1Q147U7 214 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 KCNMB1Q16558 191 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 RFPL4BQ6ZWI9 263 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 SSC4DQ8WTU2 575 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 ARPC5LQ9BPX5 153 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 SULT4A1Q9BR01 284 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 MS4A7Q9GZW8 240 aaPredicted RBP8.08□□□□□ -1.12
PRDM9-201ENST00000296682 TMEM231Q9H6L2 316 aa8.08□□□□□ -1.12
PRDM9-201ENST00000296682 SLC22A20A6NK97 555 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 CNOT4O95628 575 aaKnown RBP8.07□□□□□ -1.12
PRDM9-201ENST00000296682 GSTP1P09211 210 aaKnown RBP8.07□□□□□ -1.12
PRDM9-201ENST00000296682 ZNF735P0CB33 412 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 PRKACAP17612 351 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 EPHA1P21709 976 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 PRKACBP22694 351 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 GNRHRP30968 328 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 FABP6P51161 128 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 B3GALT5-AS1P59052 145 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms