RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 SMCO3A2RU48 225 aa2.53□□□□□ -2
HERC4-201ENST00000277817 TMEM235A6NFC5 223 aa2.53□□□□□ -2
HERC4-201ENST00000277817 ANKUB1A6NFN9 424 aa2.53□□□□□ -2
HERC4-201ENST00000277817 AIPO00170 330 aa2.53□□□□□ -2
HERC4-201ENST00000277817 BET1O15155 118 aa2.53□□□□□ -2
HERC4-201ENST00000277817 EIF4E2O60573 245 aaKnown RBP2.53□□□□□ -2
HERC4-201ENST00000277817 ALOX12BO75342 701 aa2.53□□□□□ -2
HERC4-201ENST00000277817 MRPL33O75394 65 aaKnown RBP2.53□□□□□ -2
HERC4-201ENST00000277817 GPANK1O95872 356 aa2.53□□□□□ -2
HERC4-201ENST00000277817 CD3DP04234 171 aa2.53□□□□□ -2
HERC4-201ENST00000277817 UBBP0CG47 229 aa2.53□□□□□ -2
HERC4-201ENST00000277817 UBCP0CG48 685 aaKnown RBP2.53□□□□□ -2
HERC4-201ENST00000277817 PPP3CBP16298 524 aa2.53□□□□□ -2
HERC4-201ENST00000277817 GABRG2P18507 467 aa2.53□□□□□ -2
HERC4-201ENST00000277817 M6PRP20645 277 aa2.53□□□□□ -2
HERC4-201ENST00000277817 FGF9P31371 208 aaPredicted RBP2.53□□□□□ -2
HERC4-201ENST00000277817 CD79BP40259 229 aa2.53□□□□□ -2
HERC4-201ENST00000277817 HTR5AP47898 357 aa2.53□□□□□ -2
HERC4-201ENST00000277817 GLIPR1P48060 266 aa2.53□□□□□ -2
HERC4-201ENST00000277817 CX3CR1P49238 355 aa2.53□□□□□ -2
HERC4-201ENST00000277817 TNFSF10P50591 281 aa2.53□□□□□ -2
HERC4-201ENST00000277817 PPP1CAP62136 330 aa2.53□□□□□ -2
HERC4-201ENST00000277817 NAAAQ02083 359 aa2.53□□□□□ -2
HERC4-201ENST00000277817 NPSR1Q6W5P4 371 aa2.53□□□□□ -2
HERC4-201ENST00000277817 STAC2Q6ZMT1 411 aa2.53□□□□□ -2
HERC4-201ENST00000277817 VN1R4Q7Z5H5 301 aa2.53□□□□□ -2
HERC4-201ENST00000277817 CMTM1Q8IZ96 169 aa2.53□□□□□ -2
HERC4-201ENST00000277817 SYS1Q8N2H4 156 aa2.53□□□□□ -2
HERC4-201ENST00000277817 CPEB3Q8NE35 698 aaKnown RBP2.53□□□□□ -2
HERC4-201ENST00000277817 OR6M1Q8NGM8 313 aa2.53□□□□□ -2
HERC4-201ENST00000277817 NANPQ8TBE9 248 aa2.53□□□□□ -2
HERC4-201ENST00000277817 OR51E1Q8TCB6 317 aa2.53□□□□□ -2
HERC4-201ENST00000277817 NRGNQ92686 78 aa2.53□□□□□ -2
HERC4-201ENST00000277817 NAT6Q93015 286 aa2.53□□□□□ -2
HERC4-201ENST00000277817 COX14Q96I36 57 aa2.53□□□□□ -2
HERC4-201ENST00000277817 METTL9Q9H1A3 318 aa2.53□□□□□ -2
HERC4-201ENST00000277817 PPA2Q9H2U2 334 aa2.53□□□□□ -2
HERC4-201ENST00000277817 GAREM1Q9H706 876 aa2.53□□□□□ -2
HERC4-201ENST00000277817 RPS10P5Q9NQ39 176 aa2.53□□□□□ -2
HERC4-201ENST00000277817 PTTG3PQ9NZH4 202 aa2.53□□□□□ -2
HERC4-201ENST00000277817 RAB22AQ9UL26 194 aa2.53□□□□□ -2
HERC4-201ENST00000277817 SIGLEC7Q9Y286 467 aa2.53□□□□□ -2
HERC4-201ENST00000277817 ETV7Q9Y603 341 aa2.53□□□□□ -2
HERC4-201ENST00000277817 TRPM6Q9BX84 2022 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 SCN3AQ9NY46 2000 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ANKRD11Q6UB99 2663 aaPredicted RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 A0A0D9SG52 128 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 A1L4Q6 167 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ARPC3O15145 178 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ZNF780AO75290 641 aaPredicted RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 STK17BO94768 372 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 EML2O95834 649 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 IFNA2P01563 188 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ITGB2P05107 769 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 GUSBP08236 651 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 CT62P0C5K7 136 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 TRAPPC2P0DI81 140 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 TRAPPC2BP0DI82 140 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ZNF44P15621 663 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ATF1P18846 271 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 PI3P19957 117 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 CHATP28329 748 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 CD96P40200 585 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 CAPZBP47756 277 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 SSR4P51571 173 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ATP1B3P54709 279 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 SELENOVP59797 346 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 SLC35A1P78382 337 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 HSF1Q00613 529 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 IFITM3Q01628 133 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 BDH1Q02338 343 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 AKR1C1Q04828 323 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ECH1Q13011 328 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 FAM53BQ14153 422 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 HNF4GQ14541 408 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 RFPL4BQ6ZWI9 263 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 TMPRSS11FQ6ZWK6 438 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 TMUB2Q71RG4 321 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 MISPQ8IVT2 679 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 MKXQ8IYA7 352 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 OR4D6Q8NGJ1 314 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 OR2G2Q8NGZ5 317 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 NT5CQ8TCD5 201 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ZFAND1Q8TCF1 268 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 SLC25A21Q9BQT8 299 aaPredicted RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 PAPOLGQ9BWT3 736 aaKnown RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 ARRDC1-AS1Q9H2J1 176 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 FAM60AQ9NP50 221 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 CYSLTR2Q9NS75 346 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 KCNIP1Q9NZI2 227 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 PLEKHB1Q9UF11 243 aaPredicted RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 GLS2Q9UI32 602 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 CACNA1IQ9P0X4 2223 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 A0A087WUJ7 227 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 LOC107986453A0A1B0GWG9 222 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 PRSS37A4D1T9 235 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ANKRD30BLA7E2S9 258 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 SDCBPO00560 298 aaPredicted RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 PMS2P2O95744 297 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 LALBAP00709 142 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms