RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 CSNK1EP49674 416 aaKnown RBP20.76■□□□□ 0.91
RETREG2-201ENST00000273048 CHAF1BQ13112 559 aa20.76■□□□□ 0.91
RETREG2-201ENST00000273048 HIST3H3Q16695 136 aa20.76■□□□□ 0.91
RETREG2-201ENST00000273048 TMEM176BQ3YBM2 270 aaPredicted RBP20.76■□□□□ 0.91
RETREG2-201ENST00000273048 SMRP1Q8NCR6 262 aa20.76■□□□□ 0.91
RETREG2-201ENST00000273048 OR52M1Q8NGK5 317 aa20.76■□□□□ 0.91
RETREG2-201ENST00000273048 PIGQQ9BRB3 760 aa20.76■□□□□ 0.91
RETREG2-201ENST00000273048 TRBV23-1A0A0A0MS06 115 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 IGHV1OR15-9A0A0B4J2B8 117 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 IGLV3-1P01715 115 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 DBHP09172 617 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 CLDN17P56750 224 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 SLC35A1P78382 337 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 TSC22D1Q15714 1073 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 KCNMB1Q16558 191 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 PHLDA2Q53GA4 152 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 C20orf196Q8IYI0 205 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 OXGR1Q96P68 337 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 GINS3Q9BRX5 216 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 CHST5Q9GZS9 411 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 BORCS7-ASMTA0A0B4J1R7 106 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 ZNF850A8MQ14 1090 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 PPP1CCP36873 323 aaKnown RBP20.75■□□□□ 0.91
RETREG2-201ENST00000273048 ECI1P42126 302 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 P2RY1P47900 373 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 PRSS12P56730 875 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 TMEM187Q14656 261 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 TAF9Q16594 264 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 ZNF239Q16600 458 aaKnown RBP20.75■□□□□ 0.91
RETREG2-201ENST00000273048 ACER2Q5QJU3 275 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 BRICD5Q6PL45 260 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 RFNGQ9Y644 331 aa20.75■□□□□ 0.91
RETREG2-201ENST00000273048 PHYHD1Q5SRE7 291 aa20.74■□□□□ 0.91
RETREG2-201ENST00000273048 NCMAPQ5T1S8 102 aa20.74■□□□□ 0.91
RETREG2-201ENST00000273048 PLXDC1Q8IUK5 500 aa20.74■□□□□ 0.91
RETREG2-201ENST00000273048 COMMD1Q8N668 190 aa20.74■□□□□ 0.91
RETREG2-201ENST00000273048 LINC00469Q8N7U9 141 aa20.74■□□□□ 0.91
RETREG2-201ENST00000273048 HPSE2Q8WWQ2 592 aa20.74■□□□□ 0.91
RETREG2-201ENST00000273048 RTN4IP1Q8WWV3 396 aaPredicted RBP20.74■□□□□ 0.91
RETREG2-201ENST00000273048 EDARADDQ8WWZ3 215 aa20.74■□□□□ 0.91
RETREG2-201ENST00000273048 Q96M66 194 aa20.74■□□□□ 0.91
RETREG2-201ENST00000273048 OR51M1Q9H341 326 aa20.74■□□□□ 0.91
RETREG2-201ENST00000273048 GPR173Q9NS66 373 aa20.74■□□□□ 0.91
RETREG2-201ENST00000273048 DECR2Q9NUI1 292 aa20.74■□□□□ 0.91
RETREG2-201ENST00000273048 AK3Q9UIJ7 227 aa20.74■□□□□ 0.91
RETREG2-201ENST00000273048 V9GYS6 101 aa20.74■□□□□ 0.91
RETREG2-201ENST00000273048 HEXBP07686 556 aa20.74■□□□□ 0.91
RETREG2-201ENST00000273048 RSPO1Q2MKA7 263 aaPredicted RBP20.74■□□□□ 0.91
RETREG2-201ENST00000273048 SLC25A53Q5H9E4 307 aa20.74■□□□□ 0.91
RETREG2-201ENST00000273048 MARS2Q96GW9 593 aaKnown RBP20.74■□□□□ 0.91
RETREG2-201ENST00000273048 NAA60Q9H7X0 242 aa20.74■□□□□ 0.91
RETREG2-201ENST00000273048 KCNJ16Q9NPI9 418 aa20.74■□□□□ 0.91
RETREG2-201ENST00000273048 FAM221AA4D161 298 aa20.73■□□□□ 0.91
RETREG2-201ENST00000273048 SPRY1O43609 319 aaPredicted RBP20.73■□□□□ 0.91
RETREG2-201ENST00000273048 GPR137BO60478 399 aa20.73■□□□□ 0.91
RETREG2-201ENST00000273048 ZNF728P0DKX0 622 aa20.73■□□□□ 0.91
RETREG2-201ENST00000273048 ABCA11PQ4W5N1 156 aa20.73■□□□□ 0.91
RETREG2-201ENST00000273048 TMEM182Q6ZP80 229 aaPredicted RBP20.73■□□□□ 0.91
RETREG2-201ENST00000273048 ZNF565Q8N9K5 539 aa20.73■□□□□ 0.91
RETREG2-201ENST00000273048 ADPRHL1Q8NDY3 354 aa20.73■□□□□ 0.91
RETREG2-201ENST00000273048 OR5L1Q8NGL2 311 aa20.73■□□□□ 0.91
RETREG2-201ENST00000273048 SLC39A7Q92504 469 aa20.73■□□□□ 0.91
RETREG2-201ENST00000273048 RCL1Q9Y2P8 373 aaKnown RBP20.73■□□□□ 0.91
RETREG2-201ENST00000273048 KCNIP3Q9Y2W7 256 aa20.73■□□□□ 0.91
RETREG2-201ENST00000273048 ASCC3Q8N3C0 2202 aaKnown RBP20.73■□□□□ 0.91
RETREG2-201ENST00000273048 CABIN1Q9Y6J0 2220 aa20.73■□□□□ 0.91
RETREG2-201ENST00000273048 PMELP40967 661 aa20.73■□□□□ 0.91
RETREG2-201ENST00000273048 NAXEQ8NCW5 288 aa20.73■□□□□ 0.91
RETREG2-201ENST00000273048 RARRES2Q99969 163 aa20.73■□□□□ 0.91
RETREG2-201ENST00000273048 SLC35B3Q9H1N7 401 aa20.73■□□□□ 0.91
RETREG2-201ENST00000273048 ABCA7Q8IZY2 2146 aa20.73■□□□□ 0.91
RETREG2-201ENST00000273048 OR2J2O76002 312 aa20.72■□□□□ 0.91
RETREG2-201ENST00000273048 CD27P26842 260 aa20.72■□□□□ 0.91
RETREG2-201ENST00000273048 NOVA1P51513 510 aaKnown RBP20.72■□□□□ 0.91
RETREG2-201ENST00000273048 KDF1Q8NAX2 398 aaPredicted RBP20.72■□□□□ 0.91
RETREG2-201ENST00000273048 OR1J1Q8NGS3 322 aa20.72■□□□□ 0.91
RETREG2-201ENST00000273048 FAM213BQ8TBF2 198 aa20.72■□□□□ 0.91
RETREG2-201ENST00000273048 TCEAL7Q9BRU2 100 aa20.72■□□□□ 0.91
RETREG2-201ENST00000273048 B3GALT1Q9Y5Z6 326 aa20.72■□□□□ 0.91
RETREG2-201ENST00000273048 DUX1O43812 170 aa20.72■□□□□ 0.91
RETREG2-201ENST00000273048 ARL6IP1Q15041 203 aa20.72■□□□□ 0.91
RETREG2-201ENST00000273048 AKR7LQ8NHP1 331 aa20.72■□□□□ 0.91
RETREG2-201ENST00000273048 PP6455Q8WZ26 134 aa20.72■□□□□ 0.91
RETREG2-201ENST00000273048 TINAGQ9UJW2 476 aa20.72■□□□□ 0.91
RETREG2-201ENST00000273048 PUS1Q9Y606 427 aaKnown RBP eCLIP20.72■□□□□ 0.91
RETREG2-201ENST00000273048 AP4M1O00189 453 aa20.71■□□□□ 0.91
RETREG2-201ENST00000273048 CA11O75493 328 aa20.71■□□□□ 0.91
RETREG2-201ENST00000273048 MTCP1P56278 107 aa20.71■□□□□ 0.91
RETREG2-201ENST00000273048 HNRNPKP61978 463 aaKnown RBP eCLIP20.71■□□□□ 0.91
RETREG2-201ENST00000273048 ENDOGQ14249 297 aaKnown RBP20.71■□□□□ 0.91
RETREG2-201ENST00000273048 PPA1Q15181 289 aa20.71■□□□□ 0.91
RETREG2-201ENST00000273048 OR11L1Q8NGX0 322 aa20.71■□□□□ 0.91
RETREG2-201ENST00000273048 BCL2L14Q9BZR8 327 aa20.71■□□□□ 0.91
RETREG2-201ENST00000273048 LMAN1LQ9HAT1 526 aa20.71■□□□□ 0.91
RETREG2-201ENST00000273048 SHANK1Q9Y566 2161 aa20.71■□□□□ 0.91
RETREG2-201ENST00000273048 MSR1P21757 451 aa20.71■□□□□ 0.91
RETREG2-201ENST00000273048 CTSSP25774 331 aa20.71■□□□□ 0.91
RETREG2-201ENST00000273048 EIF2S3P41091 472 aaKnown RBP20.71■□□□□ 0.91
RETREG2-201ENST00000273048 SNAI3Q3KNW1 292 aa20.71■□□□□ 0.91
RETREG2-201ENST00000273048 FBXW12Q6X9E4 464 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms