RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 FAM157AC9JC47 383 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 PHF1O43189 567 aaPredicted RBP11.36□□□□□ -0.59
SNX1-201ENST00000261889 HLA-GP17693 338 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 DVL1P1P54792 670 aaPredicted RBP11.36□□□□□ -0.59
SNX1-201ENST00000261889 CYCSP99999 105 aaKnown RBP11.36□□□□□ -0.59
SNX1-201ENST00000261889 ABCA11PQ4W5N1 156 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 C10orf91Q5T1B1 145 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 ZNF468Q5VIY5 522 aaPredicted RBP11.36□□□□□ -0.59
SNX1-201ENST00000261889 RPUSD3Q6P087 351 aaKnown RBP11.36□□□□□ -0.59
SNX1-201ENST00000261889 SPNS3Q6ZMD2 512 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 NTNG2Q96CW9 530 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 ZNF385AQ96PM9 386 aaKnown RBP11.36□□□□□ -0.59
SNX1-201ENST00000261889 PPP4R1LQ9P1A2 415 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 OSGIN2Q9Y236 505 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 TGIF2-C20orf24A0A0A6YYL0 155 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 ISG15P05161 165 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 CD37P11049 281 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 DAP3P51398 398 aaKnown RBP11.35□□□□□ -0.59
SNX1-201ENST00000261889 YPEL5P62699 121 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 SPIN3Q5JUX0 258 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 DNM1P34Q6PK57 102 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 MR1Q95460 341 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 GNRHR2Q96P88 292 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 KCNJ16Q9NPI9 418 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 P4HTMQ9NXG6 502 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 LIPGQ9Y5X9 500 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 CCDC187A0A096LP49 1063 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 PQLC2LA1A4F0 135 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 HMGB3O15347 200 aaKnown RBP11.35□□□□□ -0.59
SNX1-201ENST00000261889 EPHA1P21709 976 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 SULT1A2P50226 295 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 MTCP1P56278 107 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 TAS2R31P59538 309 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 RPS16P62249 146 aaKnown RBP11.35□□□□□ -0.59
SNX1-201ENST00000261889 C5orf46Q6UWT4 87 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 SGPP2Q8IWX5 399 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 SHDQ96IW2 340 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 MYOZ1Q9NP98 299 aaPredicted RBP11.35□□□□□ -0.59
SNX1-201ENST00000261889 PLEK2Q9NYT0 353 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 SRPK3Q9UPE1 567 aa11.35□□□□□ -0.59
SNX1-201ENST00000261889 TRBV6-7A0A0A0MS04 114 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 LIPT2A6NK58 231 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 GEMIN2O14893 280 aaKnown RBP11.34□□□□□ -0.59
SNX1-201ENST00000261889 ZNF43P17038 809 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 TMEM268Q5VZI3 342 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 NSUN5P2Q63ZY6 315 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 DTWD2Q8NBA8 298 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 RTN4IP1Q8WWV3 396 aaPredicted RBP11.34□□□□□ -0.59
SNX1-201ENST00000261889 URM1Q9BTM9 101 aaKnown RBP11.34□□□□□ -0.59
SNX1-201ENST00000261889 SMOC1Q9H4F8 434 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 OR2C1O95371 312 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 DRD1P21728 446 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 CCNOP22674 350 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 KIAA0895LQ68EN5 471 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 SLC22A25Q6T423 547 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 PEG10Q86TG7 708 aaKnown RBP11.34□□□□□ -0.59
SNX1-201ENST00000261889 AK3Q9UIJ7 227 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 IGKV3D-11A0A0A0MRZ8 115 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 TRAV39A0A0B4J263 110 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 IFITM10A6NMD0 228 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 CST4P01036 141 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 CXCL1P09341 107 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 ZNF41P51814 821 aaPredicted RBP11.34□□□□□ -0.59
SNX1-201ENST00000261889 PYY3Q5JQD4 70 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 CRIP3Q6Q6R5 217 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 FBXW12Q6X9E4 464 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 OR10D4PQ8NGN7 298 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 ZDHHC12Q96GR4 267 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 ZNF251Q9BRH9 671 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 SUCNR1Q9BXA5 334 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 C19orf12Q9NSK7 152 aa11.34□□□□□ -0.59
SNX1-201ENST00000261889 DMXL2Q8TDJ6 3036 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 ZNF726A6NNF4 738 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 IFNL4K9M1U5 179 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 SSSCA1O60232 199 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 CCL2P13500 99 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 MMP9P14780 707 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 BMP5P22003 454 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 SNCAP37840 140 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 OR2B11Q5JQS5 317 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 ZNF383Q8NA42 475 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 S100PBPQ96BU1 408 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 WFIKKN1Q96NZ8 548 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 GGACTQ9BVM4 153 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 GPR61Q9BZJ8 451 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 OR51B6Q9H340 312 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 SLC7A11Q9UPY5 501 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 ROS1P08922 2347 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 TLCD2A6NGC4 264 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 DEDDO75618 318 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 IFNA21P01568 189 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 RPS23P62266 143 aaKnown RBP11.33□□□□□ -0.6
SNX1-201ENST00000261889 ARRDC1Q8N5I2 433 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 HSF4Q9ULV5 492 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 PI4KAP42356 2102 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 HLA-HP01893 362 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 THBS4P35443 961 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 GLP1RP43220 463 aa11.33□□□□□ -0.6
SNX1-201ENST00000261889 ZNF84P51523 738 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms