RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 STMND1H3BQB6 276 aa8.84□□□□□ -1
COPB1-201ENST00000249923 KLF7O75840 302 aaPredicted RBP8.84□□□□□ -1
COPB1-201ENST00000249923 SFT2D2O95562 160 aa8.84□□□□□ -1
COPB1-201ENST00000249923 OR8U9P0C7N5 309 aa8.84□□□□□ -1
COPB1-201ENST00000249923 LYL1P12980 280 aa8.84□□□□□ -1
COPB1-201ENST00000249923 PRF1P14222 555 aa8.84□□□□□ -1
COPB1-201ENST00000249923 SPINK2P20155 84 aa8.84□□□□□ -1
COPB1-201ENST00000249923 SERPINA2P20848 420 aa8.84□□□□□ -1
COPB1-201ENST00000249923 RFC3P40938 356 aa8.84□□□□□ -1
COPB1-201ENST00000249923 PDCD1Q15116 288 aa8.84□□□□□ -1
COPB1-201ENST00000249923 DOK3Q7L591 496 aa8.84□□□□□ -1
COPB1-201ENST00000249923 SLC30A7Q8NEW0 376 aa8.84□□□□□ -1
COPB1-201ENST00000249923 IP6K3Q96PC2 410 aa8.84□□□□□ -1
COPB1-201ENST00000249923 NAA11Q9BSU3 229 aaPredicted RBP8.84□□□□□ -1
COPB1-201ENST00000249923 SUCNR1Q9BXA5 334 aa8.84□□□□□ -1
COPB1-201ENST00000249923 FOXD3Q9UJU5 478 aaPredicted RBP8.84□□□□□ -1
COPB1-201ENST00000249923 FLVCR1Q9Y5Y0 555 aa8.84□□□□□ -1
COPB1-201ENST00000249923 CD79AP11912 226 aa8.83□□□□□ -1
COPB1-201ENST00000249923 MDKP21741 143 aaPredicted RBP8.83□□□□□ -1
COPB1-201ENST00000249923 PTGER4P35408 488 aa8.83□□□□□ -1
COPB1-201ENST00000249923 HOXA1P49639 335 aaPredicted RBP8.83□□□□□ -1
COPB1-201ENST00000249923 CAV2P51636 162 aa8.83□□□□□ -1
COPB1-201ENST00000249923 HIST1H3AP68431 136 aa8.83□□□□□ -1
COPB1-201ENST00000249923 RIPPLY1Q0D2K3 151 aa8.83□□□□□ -1
COPB1-201ENST00000249923 DAZAP2Q15038 168 aaPredicted RBP8.83□□□□□ -1
COPB1-201ENST00000249923 ACTBL2Q562R1 376 aa8.83□□□□□ -1
COPB1-201ENST00000249923 HIST2H3PS2Q5TEC6 136 aa8.83□□□□□ -1
COPB1-201ENST00000249923 CYB5R2Q6BCY4 276 aa8.83□□□□□ -1
COPB1-201ENST00000249923 FOXL2NBQ6ZUU3 175 aa8.83□□□□□ -1
COPB1-201ENST00000249923 HIST2H3AQ71DI3 136 aa8.83□□□□□ -1
COPB1-201ENST00000249923 C6orf201Q7Z4U5 140 aa8.83□□□□□ -1
COPB1-201ENST00000249923 OR5H2Q8NGV7 314 aa8.83□□□□□ -1
COPB1-201ENST00000249923 FAM213BQ8TBF2 198 aa8.83□□□□□ -1
COPB1-201ENST00000249923 TMEM54Q969K7 222 aa8.83□□□□□ -1
COPB1-201ENST00000249923 PIGTQ969N2 578 aa8.83□□□□□ -1
COPB1-201ENST00000249923 SGK3Q96BR1 496 aa8.83□□□□□ -1
COPB1-201ENST00000249923 REEP6Q96HR9 211 aa8.83□□□□□ -1
COPB1-201ENST00000249923 SHDQ96IW2 340 aa8.83□□□□□ -1
COPB1-201ENST00000249923 PECRQ9BY49 303 aa8.83□□□□□ -1
COPB1-201ENST00000249923 SRXN1Q9BYN0 137 aa8.83□□□□□ -1
COPB1-201ENST00000249923 SH2D2AQ9NP31 389 aa8.83□□□□□ -1
COPB1-201ENST00000249923 KCNJ16Q9NPI9 418 aa8.83□□□□□ -1
COPB1-201ENST00000249923 IGHV1-45A0A0A0MS14 117 aa8.83□□□□□ -1
COPB1-201ENST00000249923 CCDC85CA6NKD9 419 aa8.83□□□□□ -1
COPB1-201ENST00000249923 FIGNL2A6NMB9 653 aa8.83□□□□□ -1
COPB1-201ENST00000249923 ALDH3B1P43353 468 aa8.83□□□□□ -1
COPB1-201ENST00000249923 DEFA6Q01524 100 aa8.83□□□□□ -1
COPB1-201ENST00000249923 SLC16A14Q7RTX9 510 aa8.83□□□□□ -1
COPB1-201ENST00000249923 ARRDC1Q8N5I2 433 aa8.83□□□□□ -1
COPB1-201ENST00000249923 POC1AQ8NBT0 407 aa8.83□□□□□ -1
COPB1-201ENST00000249923 GLYATL2Q8WU03 294 aa8.83□□□□□ -1
COPB1-201ENST00000249923 TCTEX1D2Q8WW35 142 aa8.83□□□□□ -1
COPB1-201ENST00000249923 COL27A1Q8IZC6 1860 aaPredicted RBP8.82□□□□□ -1
COPB1-201ENST00000249923 COX6A1P12074 109 aa8.82□□□□□ -1
COPB1-201ENST00000249923 S100PP25815 95 aa8.82□□□□□ -1
COPB1-201ENST00000249923 GUCA1AP43080 201 aaPredicted RBP8.82□□□□□ -1
COPB1-201ENST00000249923 ZNF133P52736 654 aaPredicted RBP8.82□□□□□ -1
COPB1-201ENST00000249923 KIAA0141Q14154 515 aaPredicted RBP8.82□□□□□ -1
COPB1-201ENST00000249923 CHRFAM7AQ494W8 412 aa8.82□□□□□ -1
COPB1-201ENST00000249923 PABPC1L2AQ5JQF8 200 aa8.82□□□□□ -1
COPB1-201ENST00000249923 C10orf128Q5T292 105 aa8.82□□□□□ -1
COPB1-201ENST00000249923 Q6ZSR3 168 aa8.82□□□□□ -1
COPB1-201ENST00000249923 OR2AE1Q8NHA4 323 aa8.82□□□□□ -1
COPB1-201ENST00000249923 CLDN23Q96B33 292 aa8.82□□□□□ -1
COPB1-201ENST00000249923 IMMP1LQ96LU5 166 aa8.82□□□□□ -1
COPB1-201ENST00000249923 DEFB126Q9BYW3 111 aa8.82□□□□□ -1
COPB1-201ENST00000249923 OR10A2Q9H208 303 aa8.82□□□□□ -1
COPB1-201ENST00000249923 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.82□□□□□ -1
COPB1-201ENST00000249923 SMCO4Q9NRQ5 59 aa8.82□□□□□ -1
COPB1-201ENST00000249923 HDGFL3Q9Y3E1 203 aa8.82□□□□□ -1
COPB1-201ENST00000249923 PCDHGA1Q9Y5H4 931 aa8.82□□□□□ -1
COPB1-201ENST00000249923 SHANK1Q9Y566 2161 aa8.82□□□□□ -1
COPB1-201ENST00000249923 LOC102723996A0A087X1L8 192 aa8.82□□□□□ -1
COPB1-201ENST00000249923 ACAA1P09110 424 aaPredicted RBP8.82□□□□□ -1
COPB1-201ENST00000249923 FPR2P25090 351 aa8.82□□□□□ -1
COPB1-201ENST00000249923 PHLDA2Q53GA4 152 aa8.82□□□□□ -1
COPB1-201ENST00000249923 TMEM217Q8N7C4 229 aa8.82□□□□□ -1
COPB1-201ENST00000249923 OR51T1Q8NGJ9 327 aa8.82□□□□□ -1
COPB1-201ENST00000249923 RNASE11Q8TAA1 199 aaKnown RBP8.82□□□□□ -1
COPB1-201ENST00000249923 CHST5Q9GZS9 411 aa8.82□□□□□ -1
COPB1-201ENST00000249923 NELFAQ9H3P2 528 aa8.82□□□□□ -1
COPB1-201ENST00000249923 UNKLQ9H9P5 680 aaKnown RBP8.82□□□□□ -1
COPB1-201ENST00000249923 K7EPK0 472 aa8.82□□□□□ -1
COPB1-201ENST00000249923 DHRS3O75911 302 aa8.82□□□□□ -1
COPB1-201ENST00000249923 SCGNO76038 276 aa8.82□□□□□ -1
COPB1-201ENST00000249923 OPRM1P35372 400 aa8.82□□□□□ -1
COPB1-201ENST00000249923 ZNF84P51523 738 aa8.82□□□□□ -1
COPB1-201ENST00000249923 POLR2GP62487 172 aaKnown RBP eCLIP8.82□□□□□ -1
COPB1-201ENST00000249923 SPIN3Q5JUX0 258 aa8.82□□□□□ -1
COPB1-201ENST00000249923 EIF5AL1Q6IS14 154 aaKnown RBP8.82□□□□□ -1
COPB1-201ENST00000249923 FAM71E2Q8N5Q1 922 aa8.82□□□□□ -1
COPB1-201ENST00000249923 OR56B1Q8NGI3 324 aa8.82□□□□□ -1
COPB1-201ENST00000249923 RHBDD1Q8TEB9 315 aa8.82□□□□□ -1
COPB1-201ENST00000249923 DYRK2Q92630 601 aa8.82□□□□□ -1
COPB1-201ENST00000249923 CDC6Q99741 560 aa8.82□□□□□ -1
COPB1-201ENST00000249923 A0A0J9YW62 118 aa8.81□□□□□ -1
COPB1-201ENST00000249923 A0A1W2PPE3 182 aa8.81□□□□□ -1
COPB1-201ENST00000249923 ZNF850A8MQ14 1090 aa8.81□□□□□ -1
COPB1-201ENST00000249923 ZNF705GA8MUZ8 300 aaPredicted RBP8.81□□□□□ -1
COPB1-201ENST00000249923 ATXN7O15265 892 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms