RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 BABAM2Q9NXR7 383 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 RNF7Q9UBF6 113 aa11.34□□□□□ -0.59
DDX39A-201ENST00000242776 LSM2Q9Y333 95 aaKnown RBP11.34□□□□□ -0.59
DDX39A-201ENST00000242776 A0A1B0GW55 424 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 LGALS8O00214 317 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 DVL1O14640 695 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 TBX1O43435 398 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 DUX4L2P0CJ85 424 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 DUX4L3P0CJ86 424 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 DUX4L4P0CJ87 422 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 DUX4L5P0CJ88 424 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 DUX4L6P0CJ89 424 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 DUX4L7P0CJ90 424 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 ATP6V1B1P15313 513 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 CA6P23280 308 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 LOXL3P58215 753 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 ACSM1Q08AH1 577 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 MALLQ13021 153 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 KLRD1Q13241 179 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 ALKBH1Q13686 389 aaKnown RBP11.33□□□□□ -0.6
DDX39A-201ENST00000242776 HERPUD1Q15011 391 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 KPRPQ5T749 579 aaPredicted RBP11.33□□□□□ -0.6
DDX39A-201ENST00000242776 FDX2Q6P4F2 183 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 RPL22L1Q6P5R6 122 aaKnown RBP11.33□□□□□ -0.6
DDX39A-201ENST00000242776 DUX4L9Q6RFH8 374 aaPredicted RBP11.33□□□□□ -0.6
DDX39A-201ENST00000242776 ZNF826PQ6ZT77 177 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 KCTD8Q6ZWB6 473 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 NAA40Q86UY6 237 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 RORBQ92753 470 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 OR10A2Q9H208 303 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 OPA3Q9H6K4 179 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 FN3KRPQ9HA64 309 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.33□□□□□ -0.6
DDX39A-201ENST00000242776 C1orf123Q9NWV4 160 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 FAM206AQ9NX38 181 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 DUX4Q9UBX2 424 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 NUFIP1Q9UHK0 495 aaKnown RBP11.33□□□□□ -0.6
DDX39A-201ENST00000242776 VPREB3Q9UKI3 123 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 OR52A1Q9UKL2 312 aa11.33□□□□□ -0.6
DDX39A-201ENST00000242776 NOTCH3Q9UM47 2321 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 XRCC2O43543 280 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 SRSF10O75494 262 aaKnown RBP11.32□□□□□ -0.6
DDX39A-201ENST00000242776 GRPP07492 148 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 SLC2A1P11166 492 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 GABRA5P31644 462 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 GATA4P43694 442 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 CCR9P51686 369 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 MFGE8Q08431 387 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-201ENST00000242776 MLLT11Q13015 90 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-201ENST00000242776 GK2Q14410 553 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-201ENST00000242776 TIGD6Q17RP2 521 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 RSPO1Q2MKA7 263 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-201ENST00000242776 NSUN5P1Q3KNT7 163 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 UBE2UQ5VVX9 321 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 FAM57BQ71RH2 274 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 CATSPERDQ86XM0 798 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 ZNF485Q8NCK3 441 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 Q8TCH9 128 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 UFD1Q92890 307 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 OR5M11Q96RB7 305 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 PBOV1Q9GZY1 135 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 COMMD4Q9H0A8 199 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 ZNRD1Q9P1U0 126 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 ZNF391Q9UJN7 358 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 N6AMT1Q9Y5N5 214 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 RYR3Q15413 4870 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 TRBV2A0A0J9YWF9 115 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 hCG_1807616A0A1W2PRN6 198 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 OOEPA6NGQ2 149 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 A6NLC8 198 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 TRIM64CA6NLI5 447 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 TMEM212A6NML5 194 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 TSPAN9O75954 239 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 FSTL3O95633 263 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 FBP1P09467 338 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 UBCP0CG48 685 aaKnown RBP11.32□□□□□ -0.6
DDX39A-201ENST00000242776 HSMCR30P0CW71 290 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 SMIM18P0DKX4 95 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 CFL1P23528 166 aaKnown RBP11.32□□□□□ -0.6
DDX39A-201ENST00000242776 PSMB9P28065 219 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 CD200P41217 278 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 CDK5R1Q15078 307 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 KCNJ8Q15842 424 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 NEDD8Q15843 81 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 LY6EQ16553 131 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 COLCA1Q6ZS62 124 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 REC114Q7Z4M0 266 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 COMMD2Q86X83 199 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 OR8B12Q8NGG6 310 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 OR2G2Q8NGZ5 317 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 MGLLQ99685 303 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 ADAT1Q9BUB4 502 aaKnown RBP11.32□□□□□ -0.6
DDX39A-201ENST00000242776 RGCCQ9H4X1 137 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 CNTD2Q9H8S5 307 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 AURKAIP1Q9NWT8 199 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-201ENST00000242776 SCOCQ9UIL1 159 aa11.32□□□□□ -0.6
DDX39A-201ENST00000242776 TRAV38-1A0A0B4J264 116 aa11.31□□□□□ -0.6
DDX39A-201ENST00000242776 A0A0U1RQV5 110 aa11.31□□□□□ -0.6
DDX39A-201ENST00000242776 PAHP00439 452 aa11.31□□□□□ -0.6
DDX39A-201ENST00000242776 TGFBR2P37173 567 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms