RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 SYNGR3O43761 229 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 DEDDO75618 318 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 MUC1P15941 1255 aaPredicted RBP14.17□□□□□ -0.14
LTBR-201ENST00000228918 RPL12P30050 165 aaKnown RBP14.17□□□□□ -0.14
LTBR-201ENST00000228918 NPBWR1P48145 328 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 HGFACQ04756 655 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 M1APQ8TC57 530 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 MRPL24Q96A35 216 aaKnown RBP14.17□□□□□ -0.14
LTBR-201ENST00000228918 REEP6Q96HR9 211 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 LIME1Q9H400 295 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 AK3Q9UIJ7 227 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 PADI1Q9ULC6 663 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 HSF4Q9ULV5 492 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 TNRC6BQ9UPQ9 1833 aaKnown RBP14.17□□□□□ -0.14
LTBR-201ENST00000228918 SDK2Q58EX2 2172 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 IGKV1-27A0A075B6S5 117 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 K7EPK0 472 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 SPRY1O43609 319 aaPredicted RBP14.17□□□□□ -0.14
LTBR-201ENST00000228918 MED6O75586 246 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 CST4P01036 141 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 GLAP06280 429 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 OR5H8P0DN80 308 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 SPP1P10451 314 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 SULT1A2P50226 295 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 RSU1Q15404 277 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 TAF9Q16594 264 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 HLA-BQ31612 363 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 GGNBP1Q5YKI7 109 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 GPR137CQ8N3F9 429 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 FAM71E2Q8N5Q1 922 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 MR1Q95460 341 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 CMSS1Q9BQ75 279 aaKnown RBP14.17□□□□□ -0.14
LTBR-201ENST00000228918 FAAP24Q9BTP7 215 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 ZNF581Q9P0T4 197 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 RCC2Q9P258 522 aaKnown RBP14.17□□□□□ -0.14
LTBR-201ENST00000228918 FBXL17Q9UF56 701 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 WDFY3Q8IZQ1 3526 aa14.17□□□□□ -0.14
LTBR-201ENST00000228918 EIF3GO75821 320 aaKnown RBP eCLIP14.16□□□□□ -0.14
LTBR-201ENST00000228918 KLF7O75840 302 aaPredicted RBP14.16□□□□□ -0.14
LTBR-201ENST00000228918 GAPDHP04406 335 aaKnown RBP14.16□□□□□ -0.14
LTBR-201ENST00000228918 NME2P22392 152 aa14.16□□□□□ -0.14
LTBR-201ENST00000228918 KCNJ3P48549 501 aa14.16□□□□□ -0.14
LTBR-201ENST00000228918 CHAF1BQ13112 559 aa14.16□□□□□ -0.14
LTBR-201ENST00000228918 SMCO1Q147U7 214 aa14.16□□□□□ -0.14
LTBR-201ENST00000228918 CNN3Q15417 329 aaKnown RBP14.16□□□□□ -0.14
LTBR-201ENST00000228918 TSC22D1Q15714 1073 aa14.16□□□□□ -0.14
LTBR-201ENST00000228918 IFI44Q8TCB0 444 aa14.16□□□□□ -0.14
LTBR-201ENST00000228918 PRRX2Q99811 253 aa14.16□□□□□ -0.14
LTBR-201ENST00000228918 SF3B5Q9BWJ5 86 aaKnown RBP14.16□□□□□ -0.14
LTBR-201ENST00000228918 FAM230AA0A1W2PPH8 454 aa14.16□□□□□ -0.14
LTBR-201ENST00000228918 IFNA21P01568 189 aa14.16□□□□□ -0.14
LTBR-201ENST00000228918 KLK3P07288 261 aaPredicted RBP14.16□□□□□ -0.14
LTBR-201ENST00000228918 ACAA1P09110 424 aaPredicted RBP14.16□□□□□ -0.14
LTBR-201ENST00000228918 DTYMKP23919 212 aa14.16□□□□□ -0.14
LTBR-201ENST00000228918 FCGR2CP31995 323 aa14.16□□□□□ -0.14
LTBR-201ENST00000228918 SWI5Q1ZZU3 235 aa14.16□□□□□ -0.14
LTBR-201ENST00000228918 ZNF774Q6NX45 483 aa14.16□□□□□ -0.14
LTBR-201ENST00000228918 TMEM156Q8N614 296 aa14.16□□□□□ -0.14
LTBR-201ENST00000228918 CPNE2Q96FN4 548 aaPredicted RBP14.16□□□□□ -0.14
LTBR-201ENST00000228918 AMDHD2Q9Y303 409 aa14.16□□□□□ -0.14
LTBR-201ENST00000228918 CNTRLQ7Z7A1 2325 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 CBR3O75828 277 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 FCGR3AP08637 254 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 CST2P09228 141 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 CHATP28329 748 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 RRADP55042 308 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 PIGPP57054 158 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 BTNL8Q6UX41 500 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 RPS19BP1Q86WX3 136 aaKnown RBP14.15□□□□□ -0.14
LTBR-201ENST00000228918 OR1F12Q8NHA8 337 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 SULT4A1Q9BR01 284 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 NECAP2Q9NVZ3 263 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 PLA2G2EQ9NZK7 142 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 LSM5Q9Y4Y9 91 aaKnown RBP14.15□□□□□ -0.14
LTBR-201ENST00000228918 GJE1A6NN92 205 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 TERTO14746 1132 aaKnown RBP14.15□□□□□ -0.14
LTBR-201ENST00000228918 DNPH1O43598 174 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 CRYBA1P05813 215 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 MLF1P58340 268 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 AVPI1Q5T686 147 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 DHRS11Q6UWP2 260 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 ASCL4Q6XD76 172 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 PARP11Q9NR21 331 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 TMEM38BQ9NVV0 291 aa14.15□□□□□ -0.14
LTBR-201ENST00000228918 C9J4A7 227 aa14.14□□□□□ -0.15
LTBR-201ENST00000228918 JTBO76095 146 aa14.14□□□□□ -0.15
LTBR-201ENST00000228918 FARS2O95363 451 aaKnown RBP14.14□□□□□ -0.15
LTBR-201ENST00000228918 FABP1P07148 127 aa14.14□□□□□ -0.15
LTBR-201ENST00000228918 NTF4P34130 210 aa14.14□□□□□ -0.15
LTBR-201ENST00000228918 OPRM1P35372 400 aa14.14□□□□□ -0.15
LTBR-201ENST00000228918 RBP2P50120 134 aa14.14□□□□□ -0.15
LTBR-201ENST00000228918 PRSS12P56730 875 aa14.14□□□□□ -0.15
LTBR-201ENST00000228918 TMEM33P57088 247 aa14.14□□□□□ -0.15
LTBR-201ENST00000228918 B3GALT5-AS1P59052 145 aa14.14□□□□□ -0.15
LTBR-201ENST00000228918 RAC3P60763 192 aa14.14□□□□□ -0.15
LTBR-201ENST00000228918 ZNF468Q5VIY5 522 aaPredicted RBP14.14□□□□□ -0.15
LTBR-201ENST00000228918 LHFPL2Q6ZUX7 228 aa14.14□□□□□ -0.15
LTBR-201ENST00000228918 AGBL5Q8NDL9 886 aa14.14□□□□□ -0.15
LTBR-201ENST00000228918 TOMM40LQ969M1 308 aa14.14□□□□□ -0.15
LTBR-201ENST00000228918 NAA60Q9H7X0 242 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms