RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 RAB1AP62820 205 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 TMPRSS7Q7RTY8 843 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 OSR2Q8N2R0 312 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 OR10AD1Q8NGE0 317 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 OR6K3Q8NGY3 331 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 APOBEC3DQ96AK3 386 aaPredicted RBP16.51■□□□□ 0.23
YBX3-201ENST00000228251 ZNF75AQ96N20 296 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 SCGB3A2Q96PL1 93 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 FAAP24Q9BTP7 215 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 ARL6Q9H0F7 186 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 EDARQ9UNE0 448 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 TNFSF18Q9UNG2 199 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 C5orf49A4QMS7 147 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 ZNF850A8MQ14 1090 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 GEMIN2O14893 280 aaKnown RBP16.51■□□□□ 0.23
YBX3-201ENST00000228251 CST4P01036 141 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 IGHG3P01860 377 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 PIGYQ3MUY2 71 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 NKAPLQ5M9Q1 402 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 C11orf87Q6NUJ2 197 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 FBXL14Q8N1E6 418 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 OR1K1Q8NGR3 316 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 CASTOR1Q8WTX7 329 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 PPP1R1CQ8WVI7 109 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 HPSE2Q8WWQ2 592 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 BCL2L2Q92843 193 aaPredicted RBP16.51■□□□□ 0.23
YBX3-201ENST00000228251 WBP1Q96G27 269 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 MFFQ9GZY8 342 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 GPR160Q9UJ42 338 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 ANXA10Q9UJ72 324 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 EP300Q09472 2414 aaPredicted RBP16.5■□□□□ 0.23
YBX3-201ENST00000228251 CCL2P13500 99 aa16.5■□□□□ 0.23
YBX3-201ENST00000228251 ZNF345Q14585 488 aa16.5■□□□□ 0.23
YBX3-201ENST00000228251 CHRFAM7AQ494W8 412 aa16.5■□□□□ 0.23
YBX3-201ENST00000228251 CLEC18BQ6UXF7 455 aa16.5■□□□□ 0.23
YBX3-201ENST00000228251 DPPA2Q7Z7J5 298 aa16.5■□□□□ 0.23
YBX3-201ENST00000228251 MCEMP1Q8IX19 187 aa16.5■□□□□ 0.23
YBX3-201ENST00000228251 SEC22AQ96IW7 307 aa16.5■□□□□ 0.23
YBX3-201ENST00000228251 CITED4Q96RK1 184 aa16.5■□□□□ 0.23
YBX3-201ENST00000228251 STARD10Q9Y365 291 aa16.5■□□□□ 0.23
YBX3-201ENST00000228251 SLC22A20A6NK97 555 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 RP2O75695 350 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 FCGR3AP08637 254 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 PMELP40967 661 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 RBM11P57052 281 aaKnown RBP16.49■□□□□ 0.23
YBX3-201ENST00000228251 FBXW9Q5XUX1 488 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 ZNF546Q86UE3 836 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 KCNRGQ8N5I3 272 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 OR51F2Q8NH61 342 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 LDAHQ9H6V9 325 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 ZNF701Q9NV72 531 aaPredicted RBP16.49■□□□□ 0.23
YBX3-201ENST00000228251 FAM186AA6NE01 2351 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 RNF222A6NCQ9 220 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 ZNHIT1O43257 154 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 NGFP01138 241 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 CD79AP11912 226 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 PI3P19957 117 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 PMP22Q01453 160 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 BAMBIQ13145 260 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 GSG1LQ6UXU4 331 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 Q6ZPA2 131 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 SAXO1Q8IYX7 474 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 ZNF611Q8N823 705 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 FDCSPQ8NFU4 85 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 MARVELD3Q96A59 401 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 LIME1Q9H400 295 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 CLCF1Q9UBD9 225 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 KIF25Q9UIL4 384 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 ST3GAL6Q9Y274 331 aa16.49■□□□□ 0.23
YBX3-201ENST00000228251 PDCD6O75340 191 aa16.48■□□□□ 0.23
YBX3-201ENST00000228251 CRHP06850 196 aa16.48■□□□□ 0.23
YBX3-201ENST00000228251 GLRA1P23415 457 aa16.48■□□□□ 0.23
YBX3-201ENST00000228251 WNT5AP41221 380 aa16.48■□□□□ 0.23
YBX3-201ENST00000228251 PRDX4Q13162 271 aa16.48■□□□□ 0.23
YBX3-201ENST00000228251 ANKRD55Q3KP44 614 aa16.48■□□□□ 0.23
YBX3-201ENST00000228251 ELP2Q6IA86 826 aa16.48■□□□□ 0.23
YBX3-201ENST00000228251 KCTD9Q7L273 389 aa16.48■□□□□ 0.23
YBX3-201ENST00000228251 PCNPQ8WW12 178 aaKnown RBP16.48■□□□□ 0.23
YBX3-201ENST00000228251 CMSS1Q9BQ75 279 aaKnown RBP16.48■□□□□ 0.23
YBX3-201ENST00000228251 NMES1Q9C002 83 aa16.48■□□□□ 0.23
YBX3-201ENST00000228251 OPA3Q9H6K4 179 aa16.48■□□□□ 0.23
YBX3-201ENST00000228251 TRBV6-7A0A0A0MS04 114 aa16.47■□□□□ 0.23
YBX3-201ENST00000228251 A0A0D9SG52 128 aa16.47■□□□□ 0.23
YBX3-201ENST00000228251 RRASP10301 218 aa16.47■□□□□ 0.23
YBX3-201ENST00000228251 SERPINF1P36955 418 aa16.47■□□□□ 0.23
YBX3-201ENST00000228251 ECI1P42126 302 aa16.47■□□□□ 0.23
YBX3-201ENST00000228251 NPBWR2P48146 333 aa16.47■□□□□ 0.23
YBX3-201ENST00000228251 GUSBP1Q15486 140 aa16.47■□□□□ 0.23
YBX3-201ENST00000228251 CEACAM21Q3KPI0 293 aa16.47■□□□□ 0.23
YBX3-201ENST00000228251 HIKESHIQ53FT3 197 aa16.47■□□□□ 0.23
YBX3-201ENST00000228251 RFPL4BQ6ZWI9 263 aa16.47■□□□□ 0.23
YBX3-201ENST00000228251 TMEM200AQ86VY9 491 aa16.47■□□□□ 0.23
YBX3-201ENST00000228251 SCARB1Q8WTV0 552 aa16.47■□□□□ 0.23
YBX3-201ENST00000228251 PDCD10Q9BUL8 212 aa16.47■□□□□ 0.23
YBX3-201ENST00000228251 C12orf49Q9H741 205 aa16.47■□□□□ 0.23
YBX3-201ENST00000228251 RAB18Q9NP72 206 aa16.47■□□□□ 0.23
YBX3-201ENST00000228251 PCDHB16Q9NRJ7 776 aa16.47■□□□□ 0.23
YBX3-201ENST00000228251 ZNF292O60281 2723 aa16.47■□□□□ 0.23
YBX3-201ENST00000228251 DMXL1Q9Y485 3027 aa16.46■□□□□ 0.23
YBX3-201ENST00000228251 FAM90A10PA6NDY2 464 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms