RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Gm29797A0A140LIA7 188 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Gm17655A0A1B0GT13 591 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 4932443I19RikA0A286YE38 169 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 R3hdmlA2A5I3 253 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Gm21761J3QK00 171 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Ear3O35290 156 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Prss39O70169 367 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Rpl27P61358 136 aaKnown RBP13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Sult4a1P63046 284 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Sdr39u1Q5M8N4 308 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Hist2h2abQ64522 130 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Olfr479Q7TRV1 327 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Clec2hQ8C1T8 218 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Zim1Q8C393 579 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Defb21Q8C5Z4 100 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Parp11Q8CFF0 331 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Fam169bQ8CHT6 337 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Abhd6Q8R2Y0 336 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Q8R3Y5 413 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Acer2Q8VD53 275 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Armc10Q9D0L7 306 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Tmem30cQ9D4D7 342 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 AspdhQ9DCQ2 287 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Kiaa0141Q9DCV6 510 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Srsf10Q9R0U0 262 aaKnown RBP13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Bcl3Q9Z2F6 448 aa13.21□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Igkv6-20A0A140T8P2 115 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Olfr267A2AM35 313 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Nlgn4lB0F2B4 945 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Tmem200bD3Z0P8 284 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 FblP35550 327 aaKnown RBP13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Ceacam19Q3TQ88 271 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Pced1aQ6P1Z5 449 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Olfr275Q7TS18 319 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Q8BG31 207 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Acot4Q8BWN8 421 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Mfsd9Q8C0T7 466 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Lrp11Q8CB67 483 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Txnl1Q8CDN6 289 aaKnown RBP13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Lrrc10Q8K3W2 274 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Vmn1r226Q8R2A8 298 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Olfr378Q8VGT2 314 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Cdc42ep1Q91W92 409 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Dnajb11Q99KV1 358 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Mrpl18Q9CQL5 180 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Cyb5bQ9CQX2 146 aaKnown RBP13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Eef1akmt1Q9CY45 214 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Kti12Q9D1R2 351 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Rbfox1Q9JJ43 396 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Csnk1eQ9JMK2 416 aaKnown RBP13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Sema4fQ9Z123 777 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 FggyA2AJL3 552 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Glp1rO35659 463 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Oprd1P32300 372 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Ear2P97425 156 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Selenbp2Q63836 472 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Ceacam14Q78Y72 263 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Abhd13Q80UX8 337 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Rrnad1Q8BZG5 475 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 GnalQ8CGK7 381 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Dhrs7cQ8CHS7 311 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Alg12Q8VDB2 486 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Elp5Q99L85 300 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Rab5aQ9CQD1 215 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 4933400A11RikQ9CR52 288 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Enpp5Q9EQG7 477 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Herpud2Q9JJC9 404 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Ndufaf3Q9JKL4 185 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Syt6Q9R0N8 511 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Eif2s3xQ9Z0N1 472 aaKnown RBP13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Eif2s3yQ9Z0N2 472 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Scn2aA0A0J9YTW6 2006 aa13.2□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Exph5Q0VAV2 1960 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Lrrk1Q3UHC2 2014 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Olfr1191-ps1A0A1L1STD5 311 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Scgb1b29D2XZ31 93 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Scgb1b20E9PWZ2 93 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Bbip1J3QMK2 67 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Olfr618K7N6B3 318 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Cbr2P08074 244 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Ppp1caP62137 330 aaKnown RBP13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Dlx4P70436 240 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Bpifa1P97361 278 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Anxa7Q07076 463 aaKnown RBP13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 F13bQ07968 669 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Upp2Q8CGR7 320 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Q8VE95 218 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Tmem144Q8VEH0 348 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Lnx2Q91XL2 687 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Letmd1Q924L1 360 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 D10Wsu102eQ9CX66 185 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 OcstampQ9D611 498 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Gm11214V9GX06 183 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Col4a2P08122 1707 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 BC025446A0A087WQT1 134 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 H2-T10F6T1I5 379 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Gm21721J3QMK7 227 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 GzmmO08643 264 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Entpd2O55026 495 aa13.19□□□□□ -0.3
Ushbp1-201ENSMUST00000049184 Ppt1O88531 306 aa13.19□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms