RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 AICDAQ9GZX7 198 aa12.77□□□□□ -0.36
SCARB2-216ENST00000639300 ESRP2Q9H6T0 727 aaKnown RBP12.77□□□□□ -0.36
SCARB2-216ENST00000639300 DOCK8Q8NF50 2099 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 IGHV5-10-1A0A0J9YXX1 117 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 A0A1B0GTQ1 180 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 HLA-DQB1P01920 261 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 CRYAAP02489 173 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 KIR3DL2P43630 455 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 OR2B8PP59922 312 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 RAC3P60763 192 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 MRGPREQ86SM8 312 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 NAA40Q86UY6 237 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 ZNF501Q96CX3 271 aaPredicted RBP12.77□□□□□ -0.37
SCARB2-216ENST00000639300 UBL7Q96S82 380 aaPredicted RBP12.77□□□□□ -0.37
SCARB2-216ENST00000639300 OPN4Q9UHM6 478 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 R4GN57 208 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 CCDC187A0A096LP49 1063 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 TRGV5A0A0B4J1U4 118 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 AQP8O94778 261 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 HTD2P86397 168 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 OR4D10Q8NGI6 311 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 PGLYRP3Q96LB9 341 aa12.77□□□□□ -0.37
SCARB2-216ENST00000639300 DUS4LO95620 317 aaKnown RBP12.76□□□□□ -0.37
SCARB2-216ENST00000639300 IL2RAP01589 272 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 THY1P04216 161 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 SRD5A2P31213 254 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 MMP16P51512 607 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 WDSUB1Q8N9V3 476 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 DHRS9Q9BPW9 319 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 HIPK2Q9H2X6 1198 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 SHISA3A0PJX4 238 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 TOX3O15405 576 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-216ENST00000639300 SCAF4O95104 1147 aaKnown RBP12.76□□□□□ -0.37
SCARB2-216ENST00000639300 ZIC2O95409 532 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-216ENST00000639300 VSIG8P0DPA2 414 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 OR5AP2Q8NGF4 316 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 CTHRC1Q96CG8 243 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 MSI2Q96DH6 328 aaKnown RBP12.76□□□□□ -0.37
SCARB2-216ENST00000639300 FN3KRPQ9HA64 309 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 HEATR5BQ9P2D3 2071 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 CA6P23280 308 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 NDUFA6P56556 154 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-216ENST00000639300 TSPO2Q5TGU0 170 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 RNF133Q8WVZ7 376 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 OIT3Q8WWZ8 545 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 WDR13Q9H1Z4 485 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 TTC28Q96AY4 2481 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 PNPP00491 289 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 LYPD8Q6UX82 237 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 RFESDQ8TAC1 157 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 RHOFQ9HBH0 211 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 ZMIZ1Q9ULJ6 1067 aa12.76□□□□□ -0.37
SCARB2-216ENST00000639300 SFT2D2O95562 160 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 MT-CO3P00414 261 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 C1orf210Q8IVY1 113 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 SLC25A45Q8N413 288 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 LFNGQ8NES3 379 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 RXFP4Q8TDU9 374 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 HGDQ93099 445 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 LHX4Q969G2 390 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 ZNF385AQ96PM9 386 aaKnown RBP12.75□□□□□ -0.37
SCARB2-216ENST00000639300 ZPBPQ9BS86 351 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 CELA2AP08217 269 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 OR5M8Q8NGP6 311 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 MRPS18BQ9Y676 258 aaKnown RBP12.75□□□□□ -0.37
SCARB2-216ENST00000639300 C17orf112F2Z3M2 114 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 TRIM77I1YAP6 450 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 RGS13O14921 159 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 HMGB3O15347 200 aaKnown RBP12.75□□□□□ -0.37
SCARB2-216ENST00000639300 PIN1P1O15428 100 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 ONECUT2O95948 504 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 KRASP01116 189 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 RRASP10301 218 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 RPS16P62249 146 aaKnown RBP12.75□□□□□ -0.37
SCARB2-216ENST00000639300 GNG3P63215 75 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 FAM185AQ8N0U4 392 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 SCCPDHQ8NBX0 429 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 RAB39BQ96DA2 213 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 VWCEQ96DN2 955 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 GNPNAT1Q96EK6 184 aaPredicted RBP12.75□□□□□ -0.37
SCARB2-216ENST00000639300 NARFLQ9H6Q4 476 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 UCK1Q9HA47 277 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 CA10Q9NS85 328 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 ERRFI1Q9UJM3 462 aaPredicted RBP12.75□□□□□ -0.37
SCARB2-216ENST00000639300 RCL1Q9Y2P8 373 aaKnown RBP12.75□□□□□ -0.37
SCARB2-216ENST00000639300 RLFQ13129 1914 aa12.75□□□□□ -0.37
SCARB2-216ENST00000639300 C7orf66A4D0T2 115 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 ZNF718Q3SXZ3 478 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 FHL5Q5TD97 284 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 TCFL5Q9UL49 500 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 RPH3ALQ9UNE2 315 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 CPN1P15169 458 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 ALKBH6Q3KRA9 238 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 PRSS42Q7Z5A4 293 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 GHITMQ9H3K2 345 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 TUBAL3A6NHL2 446 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 PDCD6O75340 191 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 PSMB3P49720 205 aa12.74□□□□□ -0.37
SCARB2-216ENST00000639300 PRDX4Q13162 271 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms