RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 TWIST1Q15672 202 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 C12orf76Q8N812 135 aaPredicted RBP11.84□□□□□ -0.51
UBE3A-228ENST00000638155 SNRNP40Q96DI7 357 aaKnown RBP11.84□□□□□ -0.51
UBE3A-228ENST00000638155 POMT2Q9UKY4 750 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 MASP2O00187 686 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 SOCS7O14512 581 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 IQCF3P0C7M6 154 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 COX20Q5RI15 118 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 PGA4P0DJD7 388 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 PGA5P0DJD9 388 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 YBX1P67809 324 aaKnown RBP11.84□□□□□ -0.51
UBE3A-228ENST00000638155 BSXQ3C1V8 233 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 RGPD1P0DJD0 1748 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 DOCK7Q96N67 2140 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 M0R296 226 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 T-ENOLP0DO92 83 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 LGALS7P47929 136 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 SLC39A5Q6ZMH5 540 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 TMEM229BQ8NBD8 167 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 SPPL3Q8TCT6 385 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 PBOV1Q9GZY1 135 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 PTX4Q96A99 478 aa11.84□□□□□ -0.51
UBE3A-228ENST00000638155 SLC2A10O95528 541 aa11.83□□□□□ -0.51
UBE3A-228ENST00000638155 CA3P07451 260 aa11.83□□□□□ -0.51
UBE3A-228ENST00000638155 SPATA45Q537H7 98 aa11.83□□□□□ -0.51
UBE3A-228ENST00000638155 FLYWCH2Q96CP2 140 aaKnown RBP11.83□□□□□ -0.51
UBE3A-228ENST00000638155 SPACA5Q96QH8 159 aa11.83□□□□□ -0.51
UBE3A-228ENST00000638155 LOC389332A0A1B0GUA5 103 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 FPR2P25090 351 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 CD68P34810 354 aaPredicted RBP11.83□□□□□ -0.52
UBE3A-228ENST00000638155 FZD2Q14332 565 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 RPEQ96AT9 228 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 NKAIN2Q5VXU1 208 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 DERL3Q96Q80 235 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 A0A096LPE4 126 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 A0A1W2PPZ6 126 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 LANCL1O43813 399 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 IL2RAP01589 272 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 CEBPBP17676 345 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 FUT6P51993 359 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 HLA-DRB3P79483 266 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 DPH3Q96FX2 82 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 IP6K3Q96PC2 410 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 ACER3Q9NUN7 267 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 OR2W1Q9Y3N9 320 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 MPDZO75970 2070 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 CEACAM6P40199 344 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 RHBDD2Q6NTF9 364 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 OR10G4Q8NGN3 311 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 OR10G9Q8NGN4 311 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 OR10G7Q8NGN6 311 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 TAAR3PQ9P1P4 343 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 H3BNC9 293 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 M0R082 166 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 BRS3P32247 399 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 DCTDP32321 178 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 THBS4P35443 961 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 MDH2P40926 338 aaKnown RBP11.83□□□□□ -0.52
UBE3A-228ENST00000638155 KLF3P57682 345 aaPredicted RBP11.83□□□□□ -0.52
UBE3A-228ENST00000638155 HERPUD1Q15011 391 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 LEMD1Q68G75 181 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 SLC25A26Q70HW3 274 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 FER1L5A0AVI2 2057 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 LNP1A1A4G5 178 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 SHISA7A6NL88 538 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 OR4C45A6NMZ5 311 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 ZNF26P17031 533 aaPredicted RBP11.83□□□□□ -0.52
UBE3A-228ENST00000638155 NPBWR2P48146 333 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 NCMAPQ5T1S8 102 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 LIPNQ5VXI9 398 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 RNF165Q6ZSG1 346 aa11.83□□□□□ -0.52
UBE3A-228ENST00000638155 KMT2EQ8IZD2 1858 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 COL14A1Q05707 1796 aaKnown RBP11.82□□□□□ -0.52
UBE3A-228ENST00000638155 B4GALT3O60512 393 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 HLA-GP17693 338 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 PARM1Q6UWI2 310 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 GLDNQ6ZMI3 551 aaPredicted RBP11.82□□□□□ -0.52
UBE3A-228ENST00000638155 FBXL6Q8N531 539 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 EIF4E2O60573 245 aaKnown RBP11.82□□□□□ -0.52
UBE3A-228ENST00000638155 PRRX1P54821 245 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 RRN3P1Q2M238 152 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 STAC2Q6ZMT1 411 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 Q96M85 177 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 TIMP4Q99727 224 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 GLIPR2Q9H4G4 154 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 TECRQ9NZ01 308 aaKnown RBP11.82□□□□□ -0.52
UBE3A-228ENST00000638155 FUT9Q9Y231 359 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 ID4P47928 161 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 EVX1P49640 407 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 EVX2Q03828 476 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 ALKBH6Q3KRA9 238 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 TMEFF1Q8IYR6 380 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 CDX2Q99626 313 aaPredicted RBP11.82□□□□□ -0.52
UBE3A-228ENST00000638155 SLCO2B1O94956 709 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 TCL1AP56279 114 aa11.82□□□□□ -0.52
UBE3A-228ENST00000638155 PTCRAQ6ISU1 281 aaPredicted RBP11.82□□□□□ -0.52
UBE3A-228ENST00000638155 NUFIP2Q7Z417 695 aaKnown RBP11.82□□□□□ -0.52
UBE3A-228ENST00000638155 ZNF346Q9UL40 294 aaKnown RBP11.82□□□□□ -0.52
UBE3A-228ENST00000638155 RBFOX2O43251 390 aaKnown RBP eCLIP11.82□□□□□ -0.52
UBE3A-228ENST00000638155 IL24Q13007 206 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms