RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 CDV3Q9UKY7 258 aaKnown RBP10.1□□□□□ -0.79
CLN6-217ENST00000636964 A0A1W2PPE3 182 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 CXorf65A6NEN9 183 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 STAG3L3P0CL85 134 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 GUCA1AP43080 201 aaPredicted RBP10.09□□□□□ -0.79
CLN6-217ENST00000636964 GFRA1P56159 465 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 PLGLB1Q02325 96 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 TNFRSF9Q07011 255 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 CLINT1Q14677 625 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 C10orf91Q5T1B1 145 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 TMEM17Q86X19 198 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 TMEM123Q8N131 208 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 OR51D1Q8NGF3 324 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 OR2V1Q8NHB1 315 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 SYNPRQ8TBG9 265 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 ABHD3Q8WU67 409 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 TTTY12Q9BZ98 90 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 FAM206AQ9NX38 181 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 HHLA2Q9UM44 414 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 DCDC2BA2VCK2 349 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 AHRRA9YTQ3 701 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 C22orf46C9J442 243 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 KRT33AO76009 404 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 LUMP51884 338 aaPredicted RBP10.09□□□□□ -0.79
CLN6-217ENST00000636964 RAB2AP61019 212 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 SPOCK1Q08629 439 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 RSPO4Q2I0M5 234 aaPredicted RBP10.09□□□□□ -0.79
CLN6-217ENST00000636964 NAA40Q86UY6 237 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 SUCNR1Q9BXA5 334 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 PBOV1Q9GZY1 135 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 ZNF703Q9H7S9 590 aaPredicted RBP10.09□□□□□ -0.79
CLN6-217ENST00000636964 FOXJ3Q9UPW0 622 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 IGHV3-9P01782 118 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 TTRP02766 147 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 BEX5Q5H9J7 111 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 RIPPLY2Q5TAB7 128 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 ADGRG7Q96K78 797 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 ULBP2Q9BZM5 246 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 SEBOXQ9HB31 216 aaPredicted RBP10.09□□□□□ -0.79
CLN6-217ENST00000636964 ACKR4Q9NPB9 350 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 CGGBP1Q9UFW8 167 aaPredicted RBP10.09□□□□□ -0.79
CLN6-217ENST00000636964 SLC5A6Q9Y289 635 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 FLVCR1Q9Y5Y0 555 aa10.09□□□□□ -0.79
CLN6-217ENST00000636964 CDRT15L2A8MXV6 281 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 DHHO43323 396 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 CD2P06729 351 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 ITGA5P08648 1049 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 MGMTP16455 207 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 MMP16P51512 607 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 ECH1Q13011 328 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 C3AR1Q16581 482 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 DMRTC1Q5HYR2 192 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 COMMD2Q86X83 199 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 SPAG16Q8N0X2 631 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 OR5T1Q8NG75 326 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 TMEM54Q969K7 222 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 FGGYQ96C11 551 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 GFOD1Q9NXC2 390 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 ZNF319Q9P2F9 582 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 CSAG2Q9Y5P2 127 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 KIAA1549Q9HCM3 1950 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 A0A087X0M5 115 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 A0A1B0GX30 115 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 OR5H15A6NDH6 313 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 NAP1L6A6NFF2 107 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 ZNF878C9JN71 531 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 ITGB1BP1O14713 200 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 WT1P19544 449 aaPredicted RBP10.08□□□□□ -0.8
CLN6-217ENST00000636964 SPNS3Q6ZMD2 512 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 FAM185AQ8N0U4 392 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 TMEM251Q8N6I4 163 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 NAXEQ8NCW5 288 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 STOML3Q8TAV4 291 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 OR51E1Q8TCB6 317 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 SLAMF9Q96A28 289 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 IP6K3Q96PC2 410 aa10.08□□□□□ -0.8
CLN6-217ENST00000636964 ALKBH3Q96Q83 286 aaPredicted RBP10.08□□□□□ -0.8
CLN6-217ENST00000636964 SPTA1P02549 2419 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 C5orf63A6NC05 138 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 C5orf52A6NGY3 159 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 ZNF716A6NP11 495 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 SOX15O60248 233 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 SP1P08047 785 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 MEOX1P50221 254 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 CCL11P51671 97 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 EFNB2P52799 333 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 ZNF121P58317 390 aaPredicted RBP10.07□□□□□ -0.8
CLN6-217ENST00000636964 NHLH2Q02577 135 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 AVPI1Q5T686 147 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 BAIAP2L2Q6UXY1 529 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 AAED1Q7RTV5 226 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 SMIM15Q7Z3B0 74 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.07□□□□□ -0.8
CLN6-217ENST00000636964 SVBPQ8N300 66 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 MYOZ1Q9NP98 299 aaPredicted RBP10.07□□□□□ -0.8
CLN6-217ENST00000636964 PNRC2Q9NPJ4 139 aaKnown RBP10.07□□□□□ -0.8
CLN6-217ENST00000636964 SSUH2Q9Y2M2 353 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 KCNIP3Q9Y2W7 256 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 COLCA2A8K830 154 aa10.07□□□□□ -0.8
CLN6-217ENST00000636964 TMEM238C9JI98 176 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms