RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 GALR1P47211 349 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-209ENST00000635750 SPICQ8N5J4 248 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 RBPMSQ93062 196 aaKnown RBP4.99□□□□□ -1.61
SCN1A-209ENST00000635750 GPX7Q96SL4 187 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-209ENST00000635750 SLC25A32Q9H2D1 315 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 UQCC1Q9NVA1 299 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 PLA2G3Q9NZ20 509 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 NAT8BQ9UHF3 227 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 HSPB8Q9UJY1 196 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 ANKRD31Q8N7Z5 1873 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 ALG1L2C9J202 215 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 ATXN7O15265 892 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-209ENST00000635750 SIX6O95475 246 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 NQO2P16083 231 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 CEBPDP49716 269 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-209ENST00000635750 DAPP51397 102 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 DPTQ07507 201 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 MOGAT2Q3SYC2 334 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 RNFT1Q5M7Z0 435 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF343Q6P1L6 599 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 COMMD1Q8N668 190 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 FOXB1Q99853 325 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 LAMB4A4D0S4 1761 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 SCN8AQ9UQD0 1980 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 RICTORQ6R327 1708 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 J3KRW8 73 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 DEDDO75618 318 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 ARG1P05089 322 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 SSBP1Q04837 148 aaKnown RBP4.99□□□□□ -1.61
SCN1A-209ENST00000635750 FUT7Q11130 342 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF77Q15935 545 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 WDR73Q6P4I2 378 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 PRSS45Q7RTY3 260 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 ZC3H3Q8IXZ2 948 aaKnown RBP4.99□□□□□ -1.61
SCN1A-209ENST00000635750 PTPMT1Q8WUK0 201 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-209ENST00000635750 ATG101Q9BSB4 218 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 RCL1Q9Y2P8 373 aaKnown RBP4.99□□□□□ -1.61
SCN1A-209ENST00000635750 TCRBV3S1A0A5B6 114 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 CCL21O00585 134 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 MELTFP08582 738 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 RNF224P0DH78 156 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 PGA3P0DJD8 388 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 MGMTP16455 207 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 ETV1P50549 477 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 DDB2Q92466 427 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 SPSB1Q96BD6 273 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 MS4A6EQ96DS6 147 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 C3orf80F5H4A9 247 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 PLPP1O14494 284 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 WNT9BO14905 357 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 FUT3P21217 361 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 CIRBPQ14011 172 aaKnown RBP4.99□□□□□ -1.61
SCN1A-209ENST00000635750 TMEM183BQ1AE95 376 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 CLEC12BQ2HXU8 276 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 TCTN3Q6NUS6 607 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 DHRS4L2Q6PKH6 230 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 Q6ZPB1 254 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-209ENST00000635750 CADM4Q8NFZ8 388 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 OR4S2Q8NH73 311 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 ALKBH3Q96Q83 286 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-209ENST00000635750 ATOH8Q96SQ7 321 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 TEAD3Q99594 435 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 PIK3C2AO00443 1686 aa4.99□□□□□ -1.61
SCN1A-209ENST00000635750 C4BP0C0L5 1744 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 C2CD4DB7Z1M9 353 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 GPX5O75715 221 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 B3GALT4O96024 378 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 CLDN18P56856 261 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 PFN3P60673 137 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 ATP6V1FQ16864 119 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 SAXO2Q658L1 398 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF429Q86V71 674 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 OR8I2Q8N0Y5 310 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 AKR7LQ8NHP1 331 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 LTB4R2Q9NPC1 389 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 A0A1W2PS18 150 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 IGSF23A1L1A6 192 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 GJB3O75712 270 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 ALPLP05186 524 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 COX6CP09669 75 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 CA6P23280 308 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 BAK1Q16611 211 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 TEX261Q6UWH6 196 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 RHOUQ7L0Q8 258 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 MAGT1Q9H0U3 335 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 MBNL1Q9NR56 388 aaKnown RBP4.98□□□□□ -1.61
SCN1A-209ENST00000635750 PSG11Q9UQ72 335 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 H0Y8X5 98 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 NPPBP16860 134 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 TMPRSS3P57727 454 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 LOXL3P58215 753 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 SLC7A5P1Q8MH63 180 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 TCTEX1D1Q8N7M0 179 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 C16orf52Q8NHV5 167 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 ARRDC2Q8TBH0 407 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 HGDQ93099 445 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 NEURL2Q9BR09 285 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 PIMREGQ9BSJ6 248 aa4.98□□□□□ -1.61
SCN1A-209ENST00000635750 DOK5Q9P104 306 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms