RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 PITPNBP48739 271 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 RBP2P50120 134 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 RIPPLY3P57055 190 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 SEC61A1P61619 476 aaKnown RBP12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 GNB2P62879 340 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 LCN2P80188 198 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 ACSM1Q08AH1 577 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 IL24Q13007 206 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 LHFPL2Q6ZUX7 228 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 POC1AQ8NBT0 407 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 NPRL2Q8WTW4 380 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 RGP1Q92546 391 aaPredicted RBP12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 DNTTIP1Q9H147 329 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 NEK6Q9HC98 313 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 RASL12Q9NYN1 266 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 DNAJB11Q9UBS4 358 aa12.31□□□□□ -0.44
CDC42BPB-209ENST00000634889 A0A0G2JMP0 313 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 A0A0X1KG70 313 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 KIAA1324LA8MWY0 1029 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 J3QLI3 93 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 RGS10O43665 173 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 GYPAP02724 150 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 OCM2P0CE71 109 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 OCMP0CE72 109 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 PGA5P0DJD9 388 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 HNF1AP20823 631 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 GLRA1P23415 457 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 AZGP1P25311 298 aaKnown RBP12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 ZFP36P26651 326 aaKnown RBP12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 ATP1B3P54709 279 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 IRF3Q14653 427 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 CR1LQ2VPA4 569 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 C11orf91Q3C1V1 193 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 YIF1BQ5BJH7 314 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 FAM120AOSQ5T036 256 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 ATPAF1Q5TC12 328 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 STUMQ69YW2 141 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 LYPD2Q6UXB3 125 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 PRSS48Q7RTY5 328 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 CALHM1Q8IU99 346 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 OR4M2Q8NGB6 313 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 GHSRQ92847 366 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 TMIGD2Q96BF3 282 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 PGLYRP3Q96LB9 341 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 OPALINQ96PE5 141 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 NRIP2Q9BQI9 281 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 SHARPINQ9H0F6 387 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 WDR13Q9H1Z4 485 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 ZCCHC4Q9H5U6 513 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 NLKQ9UBE8 527 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 CLN8Q9UBY8 286 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 OR5V1Q9UGF6 321 aa12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 LSM2Q9Y333 95 aaKnown RBP12.3□□□□□ -0.44
CDC42BPB-209ENST00000634889 IGKV1-27A0A075B6S5 117 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 IGHV3OR15-7A0A075B7D8 119 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 TMPRSS2O15393 492 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 PHF1O43189 567 aaPredicted RBP12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 ADAM20O43506 726 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 SULT1B1O43704 296 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 SYNGR1O43759 233 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 MTCP1P56278 107 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 SPHARQ15513 63 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 SMIM21Q3B7S5 101 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 CHRFAM7AQ494W8 412 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 DCAF12L2Q5VW00 463 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 ZNF529Q6P280 563 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 ZNF841Q6ZN19 808 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 ANGPTL5Q86XS5 388 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 OR13C9Q8NGT0 318 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 SGCDQ92629 289 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 THRSPQ92748 146 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 TMEM106AQ96A25 262 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 HES4Q9HCC6 221 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 CTSZQ9UBR2 303 aa12.29□□□□□ -0.44
CDC42BPB-209ENST00000634889 TRBV5-5A0A0J9YX44 114 aa12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 NKX6-3A6NJ46 265 aa12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 OR2AT4A6NND4 320 aa12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 HOXB4P17483 251 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 CELP19835 753 aa12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 SOX2P48431 317 aa12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 GABARAPL2P60520 117 aa12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 ERVK11-1P61568 191 aa12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 Q499Y3 187 aa12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 WDR25Q64LD2 544 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 ACP7Q6ZNF0 438 aa12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 SLC36A1Q7Z2H8 476 aa12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 MKXQ8IYA7 352 aa12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 Q8IYB0 196 aa12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 TEX29Q8N6K0 151 aa12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 ZFP41Q8N8Y5 198 aa12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 ANGPTL6Q8NI99 470 aa12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 SEH1LQ96EE3 360 aa12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 CPNE2Q96FN4 548 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 BEX2Q9BXY8 128 aa12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 FN1P02751 2386 aaKnown RBP12.28□□□□□ -0.44
CDC42BPB-209ENST00000634889 MRPS14O60783 128 aaKnown RBP12.27□□□□□ -0.45
CDC42BPB-209ENST00000634889 NXPH2O95156 264 aa12.27□□□□□ -0.45
CDC42BPB-209ENST00000634889 RAB3AP20336 220 aa12.27□□□□□ -0.45
CDC42BPB-209ENST00000634889 EEF1B2P24534 225 aaKnown RBP12.27□□□□□ -0.45
CDC42BPB-209ENST00000634889 GMFBP60983 142 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms