RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 DLL4Q9NR61 685 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 JKAMPQ9P055 326 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 GHRLQ9UBU3 117 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 FBLN5Q9UBX5 448 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 RAB22AQ9UL26 194 aa8.14□□□□□ -1.11
PDLIM5-223ENST00000627587 A0A0A6YYH2 397 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 IGHV1-18A0A0C4DH31 117 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 LINC00854A0A1B0GVQ3 168 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 FAM230AA0A1W2PPH8 454 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 MEIOCA2RUB1 952 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 A6NJ64 397 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 CD300LBA8K4G0 201 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 SCGNO76038 276 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 CECR9P0C854 216 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 FAM157BP0CG42 384 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 ALDH3B1P43353 468 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 FUT6P51993 359 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 UCP2P55851 309 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 PPP1CBP62140 327 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 ASAH1Q13510 395 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 FAM189A2Q15884 450 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 C1QTNF12Q5T7M4 302 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 HACD4Q5VWC8 232 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 ZNF57Q68EA5 555 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 RAB12Q6IQ22 244 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 MOB3CQ70IA8 216 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 OR2W3Q7Z3T1 314 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 OR5D18Q8NGL1 313 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 KCNG3Q8TAE7 436 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 SMIM4Q8WVI0 70 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 TNFAIP8L1Q8WVP5 186 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 COX4I2Q96KJ9 171 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 ACTR6Q9GZN1 396 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 C11orf54Q9H0W9 315 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 CST11Q9H112 138 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 NAV3Q8IVL0 2385 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 A0A0A6YYD4 124 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 ANKRD30BLA7E2S9 258 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 ZNF850A8MQ14 1090 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 GABARAPH6UMI1 98 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 RAB27BO00194 218 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 GSTZ1O43708 216 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 CST4P01036 141 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 CD3GP09693 182 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 RAD52P43351 418 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 ATP1B3P54709 279 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 FAM27E3Q08E93 113 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 PPA1Q15181 289 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 RNASE12Q5GAN4 147 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 SPATA46Q5T0L3 261 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 FBXW12Q6X9E4 464 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 NRARPQ7Z6K4 114 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 ZDHHC23Q8IYP9 409 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 OR1J1Q8NGS3 322 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 HPSE2Q8WWQ2 592 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 FAM46BQ96A09 425 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 NEDD4LQ96PU5 975 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 GAL3ST1Q99999 423 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 USB1Q9BQ65 265 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 TMEM59Q9BXS4 323 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 ELOVL5Q9NYP7 299 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 NPAP1Q9NZP6 1156 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 GPR160Q9UJ42 338 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 ING4Q9UNL4 249 aa8.13□□□□□ -1.11
PDLIM5-223ENST00000627587 ABCA2Q9BZC7 2435 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 TRAV18A0A075B6X5 111 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 TMEM225BP0DP42 221 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 TUBG1P23258 451 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 CALCRP30988 508 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 SRP9P49458 86 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 SORDQ00796 357 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 PRDX4Q13162 271 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 DEFB113Q30KQ7 82 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 C3orf36Q3SXR2 165 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 SLC22A6Q4U2R8 563 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 C1orf174Q8IYL3 243 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 BHLHE23Q8NDY6 225 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 OR52I2Q8NH67 350 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 FCAMRQ8WWV6 532 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 CMBLQ96DG6 245 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 HIST1H2AAQ96QV6 131 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 NICN1Q9BSH3 213 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 URM1Q9BTM9 101 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 BCL2L14Q9BZR8 327 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 OR2J1Q9GZK6 312 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 SLC22A4Q9H015 551 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 LPAR5Q9H1C0 372 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 LIME1Q9H400 295 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 ELL3Q9HB65 397 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 TUBG2Q9NRH3 451 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 ELF5Q9UKW6 265 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 PLEKHA6Q9Y2H5 1048 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 RBMX2Q9Y388 322 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 ABCA4P78363 2273 aa8.12□□□□□ -1.11
PDLIM5-223ENST00000627587 hCG_2014768A0A024R1R8 64 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 IGHV2OR16-5A0A0B4J2B6 119 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 IGKV1-12A0A0C4DH73 117 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 TUBAL3A6NHL2 446 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 C16orf97H3BN30 126 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 CDC14BO60729 498 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms