RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 TFAP2CQ92754 450 aa13.9□□□□□ -0.18
UBE3D-208ENST00000626828 TMEM80Q96HE8 168 aa13.9□□□□□ -0.18
UBE3D-208ENST00000626828 DIMT1Q9UNQ2 313 aaKnown RBP13.9□□□□□ -0.18
UBE3D-208ENST00000626828 EXOSC1Q9Y3B2 195 aaKnown RBP13.9□□□□□ -0.18
UBE3D-208ENST00000626828 TMEM212A6NML5 194 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 C22orf46C9J442 243 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 E9PI62 339 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 FSHBP01225 129 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 PGA5P0DJD9 388 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 ZNF20P17024 532 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 AMY2BP19961 511 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 EPHA1P21709 976 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 PRKACBP22694 351 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 MPZP25189 248 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 ETV1P50549 477 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 ATP1B3P54709 279 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 CNN3Q15417 329 aaKnown RBP13.89□□□□□ -0.19
UBE3D-208ENST00000626828 CCDC58Q4VC31 144 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 LRRC10Q5BKY1 277 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 ARMCX4Q5H9R4 360 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 UTS2BQ765I0 119 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 BTN2A1Q7KYR7 527 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 ANGPTL5Q86XS5 388 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 DNAAF1Q8NEP3 725 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 OR5AK2Q8NH90 309 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 TRMT10AQ8TBZ6 339 aaKnown RBP13.89□□□□□ -0.19
UBE3D-208ENST00000626828 ZNF418Q8TF45 676 aaPredicted RBP13.89□□□□□ -0.19
UBE3D-208ENST00000626828 GGHQ92820 318 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 ADAT3Q96EY9 351 aaPredicted RBP13.89□□□□□ -0.19
UBE3D-208ENST00000626828 BORCS8Q96FH0 119 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 DMRTB1Q96MA1 342 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 MDFIQ99750 246 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 PKIBQ9C010 78 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 COMMD4Q9H0A8 199 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 SMURF1Q9HCE7 757 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 PLCXD1Q9NUJ7 323 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 NUP50Q9UKX7 468 aa13.89□□□□□ -0.19
UBE3D-208ENST00000626828 TRBV2A0A0J9YWF9 115 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 EFCAB10A6NFE3 127 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 NKX6-3A6NJ46 265 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 H0YHG0 523 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 SYNGR1O43759 233 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 GNAO1P09471 354 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 PSG2P11465 335 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 ATF1P18846 271 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 MYL12AP19105 171 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 GABRA2P47869 451 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 IL13RA1P78552 427 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 ST3GAL4Q11206 333 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 IL24Q13007 206 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 RPL22L1Q6P5R6 122 aaKnown RBP13.88□□□□□ -0.19
UBE3D-208ENST00000626828 ACP7Q6ZNF0 438 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 OR13C3Q8NGS6 347 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 FBLIM1Q8WUP2 373 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 ST8SIA4Q92187 359 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 UPRTQ96BW1 309 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 CNTD2Q9H8S5 307 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 NEK6Q9HC98 313 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 BABAM2Q9NXR7 383 aa13.88□□□□□ -0.19
UBE3D-208ENST00000626828 ZNF879B4DU55 563 aa13.87□□□□□ -0.19
UBE3D-208ENST00000626828 SIGLEC5O15389 551 aa13.87□□□□□ -0.19
UBE3D-208ENST00000626828 ZFPL1O95159 310 aa13.87□□□□□ -0.19
UBE3D-208ENST00000626828 PIPP12273 146 aaPredicted RBP13.87□□□□□ -0.19
UBE3D-208ENST00000626828 RBP2P50120 134 aa13.87□□□□□ -0.19
UBE3D-208ENST00000626828 SMIM21Q3B7S5 101 aa13.87□□□□□ -0.19
UBE3D-208ENST00000626828 USP43Q70EL4 1123 aa13.87□□□□□ -0.19
UBE3D-208ENST00000626828 CALHM1Q8IU99 346 aa13.87□□□□□ -0.19
UBE3D-208ENST00000626828 FAM216BQ8N7L0 139 aa13.87□□□□□ -0.19
UBE3D-208ENST00000626828 OR10AC1Q8NH08 325 aa13.87□□□□□ -0.19
UBE3D-208ENST00000626828 NPRL2Q8WTW4 380 aa13.87□□□□□ -0.19
UBE3D-208ENST00000626828 NRIP2Q9BQI9 281 aa13.87□□□□□ -0.19
UBE3D-208ENST00000626828 CNOT2Q9NZN8 540 aaKnown RBP13.87□□□□□ -0.19
UBE3D-208ENST00000626828 IGKV1D-17A0A075B6S4 117 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 RNF212BA8MTL3 300 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 FCN3O75636 299 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 NXPH2O95156 264 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 OCM2P0CE71 109 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 OCMP0CE72 109 aaPredicted RBP13.86□□□□□ -0.19
UBE3D-208ENST00000626828 PRDX2P32119 198 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 GTF2A1P52655 376 aaPredicted RBP13.86□□□□□ -0.19
UBE3D-208ENST00000626828 MTCP1P56278 107 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 FGF12P61328 243 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 ERVK11-1P61568 191 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 IKZF1Q13422 519 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 KLF17Q5JT82 389 aaPredicted RBP13.86□□□□□ -0.19
UBE3D-208ENST00000626828 OR2G6Q5TZ20 316 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 SERPINA12Q8IW75 414 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 MKXQ8IYA7 352 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 BPIFB2Q8N4F0 458 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 LY6G5BQ8NDX9 201 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 BPIFB6Q8NFQ5 453 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 OR51A4Q8NGJ6 313 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 OR5D14Q8NGL3 314 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 NRG4Q8WWG1 115 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 SPSB1Q96BD6 273 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 SDSLQ96GA7 329 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 ZNF488Q96MN9 340 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 GAFA1Q96PS6 74 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 JMJD8Q96S16 334 aa13.86□□□□□ -0.19
UBE3D-208ENST00000626828 PDCD1LG2Q9BQ51 273 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms