RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 DOC2BQ14184 412 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 INO80EQ8NBZ0 244 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-229ENST00000622668 MRGPRDQ8TDS7 321 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 DPF1Q92782 380 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 SDHAF2Q9NX18 166 aa7.91□□□□□ -1.14
HDAC9-229ENST00000622668 RANBP2P49792 3224 aaKnown RBP7.9□□□□□ -1.14
HDAC9-229ENST00000622668 IGHV3-43A0A0B4J1X8 118 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 RFPL4AA6NLU0 287 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 RFPL4AL1F8VTS6 287 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 HPGDSO60760 199 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 TFP02787 698 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 PDGFAP04085 211 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 ACSM4P0C7M7 580 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 IGHV3-43DP0DP04 118 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 CAV2P51636 162 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 TMBIM6P55061 237 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 ARF6P62330 175 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 FGL1Q08830 312 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 MSMO1Q15800 293 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 CD276Q5ZPR3 534 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 RPUSD3Q6P087 351 aaKnown RBP7.9□□□□□ -1.14
HDAC9-229ENST00000622668 OR4A16Q8NH70 328 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 TMEM68Q96MH6 324 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 TXNL4BQ9NX01 149 aaKnown RBP7.9□□□□□ -1.14
HDAC9-229ENST00000622668 TMEFF2Q9UIK5 374 aaPredicted RBP7.9□□□□□ -1.14
HDAC9-229ENST00000622668 ZDHHC8Q9ULC8 765 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 MYO9AB2RTY4 2548 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 A0A0A6YYH2 397 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 A6NJ64 397 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 ZFPL1O95159 310 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 DAOP14920 347 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 MAGEB1P43366 347 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 RAB13P51153 203 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 DLX5P56178 289 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 PHLDA2Q53GA4 152 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 FAM27D1Q5T7N8 215 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 METAP1DQ6UB28 335 aaPredicted RBP7.9□□□□□ -1.14
HDAC9-229ENST00000622668 RPRMLQ8N4K4 120 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 NANOGP1Q8N7R0 232 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 PELI1Q96FA3 418 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 NTN4Q9HB63 628 aa7.9□□□□□ -1.14
HDAC9-229ENST00000622668 MRPS18CQ9Y3D5 142 aaKnown RBP7.9□□□□□ -1.14
HDAC9-229ENST00000622668 TEX46H3BTG2 121 aa7.9□□□□□ -1.15
HDAC9-229ENST00000622668 HSD17B6O14756 317 aa7.9□□□□□ -1.15
HDAC9-229ENST00000622668 SCG5P05408 212 aa7.9□□□□□ -1.15
HDAC9-229ENST00000622668 CSF3P09919 207 aa7.9□□□□□ -1.15
HDAC9-229ENST00000622668 ZNF418Q8TF45 676 aaPredicted RBP7.9□□□□□ -1.15
HDAC9-229ENST00000622668 CHPT1Q8WUD6 406 aa7.9□□□□□ -1.15
HDAC9-229ENST00000622668 SPIN2AQ99865 258 aa7.9□□□□□ -1.15
HDAC9-229ENST00000622668 SPIN2BQ9BPZ2 258 aa7.9□□□□□ -1.15
HDAC9-229ENST00000622668 GABARAPL1Q9H0R8 117 aa7.9□□□□□ -1.15
HDAC9-229ENST00000622668 NUDT15Q9NV35 164 aa7.9□□□□□ -1.15
HDAC9-229ENST00000622668 SLC25A10Q9UBX3 287 aaPredicted RBP7.9□□□□□ -1.15
HDAC9-229ENST00000622668 PLEKHB1Q9UF11 243 aaPredicted RBP7.9□□□□□ -1.15
HDAC9-229ENST00000622668 TMEM235A6NFC5 223 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 KLK2P20151 261 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 FUT3P21217 361 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 RTL8BQ17RB0 113 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 UBAC2Q8NBM4 344 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 GPA33Q99795 319 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 ZDHHC11Q9H8X9 412 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 CRIM1Q9NZV1 1036 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 MGAT4AQ9UM21 535 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 SF3B6Q9Y3B4 125 aaKnown RBP7.89□□□□□ -1.15
HDAC9-229ENST00000622668 ABCA12Q86UK0 2595 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 E9PI62 339 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 NPIPB9F8W1W9 429 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 J3QT63 122 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 CYB5R3P00387 301 aaPredicted RBP7.89□□□□□ -1.15
HDAC9-229ENST00000622668 OR8U9P0C7N5 309 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 PRAMEF5Q5TYX0 476 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 RFPL4BQ6ZWI9 263 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 OR8U1Q8NH10 309 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 SCGB1C1Q8TD33 95 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 MBOAT4Q96T53 435 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 DHRS9Q9BPW9 319 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 METTL17Q9H7H0 456 aaPredicted RBP7.89□□□□□ -1.15
HDAC9-229ENST00000622668 OR6C3Q9NZP0 311 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 IL19Q9UHD0 177 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 NUP210Q8TEM1 1887 aaPredicted RBP7.89□□□□□ -1.15
HDAC9-229ENST00000622668 SHANK1Q9Y566 2161 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 IGKV1D-42A0A075B6H8 117 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 FXYD6-FXYD2A0A087WZ82 144 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 A0A1W2PNU3 283 aaPredicted RBP7.89□□□□□ -1.15
HDAC9-229ENST00000622668 DCTN6O00399 190 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 FOXH1O75593 365 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 EGR4Q05215 589 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 PLA2G7Q13093 441 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 HACD4Q5VWC8 232 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 BEST4Q8NFU0 473 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 GLYATL2Q8WU03 294 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 SNAPC3Q92966 411 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 SCMH1Q96GD3 660 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 FXYD6Q9H0Q3 95 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 ZNF696Q9H7X3 374 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 HEYLQ9NQ87 328 aaPredicted RBP7.89□□□□□ -1.15
HDAC9-229ENST00000622668 SIRT7Q9NRC8 400 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 ALPK3Q96L96 1907 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 MEIOCA2RUB1 952 aa7.89□□□□□ -1.15
HDAC9-229ENST00000622668 IL18BPO95998 194 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms