RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 TAGLNQ01995 201 aaKnown RBP8.2□□□□□ -1.1
PDPN-212ENST00000621990 SLC9A3R2Q15599 337 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 RSPO4Q2I0M5 234 aaPredicted RBP8.2□□□□□ -1.1
PDPN-212ENST00000621990 BEX5Q5H9J7 111 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 PRSS54Q6PEW0 395 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 LHFPL2Q6ZUX7 228 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 ESX1Q8N693 406 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 POC1AQ8NBT0 407 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 ROBO4Q8WZ75 1007 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 ZNF775Q96BV0 537 aaPredicted RBP8.2□□□□□ -1.1
PDPN-212ENST00000621990 AQP10Q96PS8 301 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 ALKBH3Q96Q83 286 aaPredicted RBP8.2□□□□□ -1.1
PDPN-212ENST00000621990 WNT5BQ9H1J7 359 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 GPR35Q9HC97 309 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 CYTL1Q9NRR1 136 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 TMEM100Q9NV29 134 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 IGKV3D-15A0A087WSY6 115 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 PMS2P1A4D2B8 440 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 PINLYPA6NC86 204 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 MPTX1A8MV57 137 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 F5H0A9 414 aaPredicted RBP8.2□□□□□ -1.1
PDPN-212ENST00000621990 LGALS8O00214 317 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 ADAP1O75689 374 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 MMP7P09237 267 aaPredicted RBP8.2□□□□□ -1.1
PDPN-212ENST00000621990 TMEM225BP0DP42 221 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 PI3P19957 117 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 GLRA1P23415 457 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 STARP49675 285 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 SIGLEC14Q08ET2 396 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 OR8B8Q15620 311 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 PLEKHN1Q494U1 663 aaPredicted RBP8.2□□□□□ -1.1
PDPN-212ENST00000621990 WIPI1Q5MNZ9 446 aaPredicted RBP8.2□□□□□ -1.1
PDPN-212ENST00000621990 STPG2Q8N412 459 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 DCUN1D4Q92564 292 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 SPSB4Q96A44 273 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 C2orf50Q96LR7 162 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 PLEKHJ1Q9NW61 149 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 P4HTMQ9NXG6 502 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 ATPIF1Q9UII2 106 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 ANXA10Q9UJ72 324 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 RTTNQ86VV8 2226 aa8.2□□□□□ -1.1
PDPN-212ENST00000621990 HTR3BO95264 441 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 SERPINA5P05154 406 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 GABRR1P24046 479 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 RGS19P49795 217 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 RBP2P50120 134 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 STK11Q15831 433 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 CEACAM16Q2WEN9 425 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 MAFIPQ8WZ33 124 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 OR10C1Q96KK4 312 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 TECTBQ96PL2 329 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 TAAR9Q96RI9 348 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 LDAHQ9H6V9 325 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 ELL3Q9HB65 397 aaPredicted RBP8.19□□□□□ -1.1
PDPN-212ENST00000621990 DOCK10Q96BY6 2186 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 TEX46H3BTG2 121 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 IFNA2P01563 188 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 LCATP04180 440 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 CTSDP07339 412 aaPredicted RBP8.19□□□□□ -1.1
PDPN-212ENST00000621990 CHATP28329 748 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 PTGER4P35408 488 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 HTR5AP47898 357 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 FAM3AP98173 230 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 RSU1Q15404 277 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 UQCC3Q6UW78 93 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 DHRS11Q6UWP2 260 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 AKR7LQ8NHP1 331 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 FGFBP3Q8TAT2 258 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 SLC39A7Q92504 469 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 C1QTNF5Q9BXJ0 243 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 ZNF701Q9NV72 531 aaPredicted RBP8.19□□□□□ -1.1
PDPN-212ENST00000621990 DNAJB11Q9UBS4 358 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 KMT2EQ8IZD2 1858 aa8.19□□□□□ -1.1
PDPN-212ENST00000621990 CRYM-AS1A6NIL9 109 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 KCNAB3O43448 404 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 NRASP01111 189 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 PET100P0DJ07 73 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 TPT1P13693 172 aaKnown RBP8.18□□□□□ -1.1
PDPN-212ENST00000621990 COLCA1Q6ZS62 124 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 SKA3Q8IX90 412 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 ABHD3Q8WU67 409 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 SPOCK3Q9BQ16 436 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 HDHD3Q9BSH5 251 aaPredicted RBP8.18□□□□□ -1.1
PDPN-212ENST00000621990 LINC00470Q9BZP3 86 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 STRADBQ9C0K7 418 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 PRDM14Q9GZV8 571 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 PIGMQ9H3S5 423 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 PRR13Q9NZ81 148 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 OR5AC2Q9NZP5 309 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 AK3Q9UIJ7 227 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 BOKQ9UMX3 212 aaPredicted RBP8.18□□□□□ -1.1
PDPN-212ENST00000621990 C14orf166Q9Y224 244 aaKnown RBP8.18□□□□□ -1.1
PDPN-212ENST00000621990 IGKV1-12A0A0C4DH73 117 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 FAM230AA0A1W2PPH8 454 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 RAB19A4D1S5 217 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 SPRY1O43609 319 aaPredicted RBP8.18□□□□□ -1.1
PDPN-212ENST00000621990 ANGPTL7O43827 346 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 TRAPPC6AO75865 159 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 NEURL1O76050 574 aa8.18□□□□□ -1.1
PDPN-212ENST00000621990 IGKV1D-12P01611 117 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms