RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 PSMD7P51665 324 aa13.6□□□□□ -0.23
CD40-207ENST00000620709 ZNF846Q147U1 533 aa13.6□□□□□ -0.23
CD40-207ENST00000620709 TMEM255AQ5JRV8 349 aa13.6□□□□□ -0.23
CD40-207ENST00000620709 PARP16Q8N5Y8 322 aa13.6□□□□□ -0.23
CD40-207ENST00000620709 FAM71F1Q96KD3 344 aaPredicted RBP13.6□□□□□ -0.23
CD40-207ENST00000620709 WDFY2Q96P53 400 aa13.6□□□□□ -0.23
CD40-207ENST00000620709 GAL3ST1Q99999 423 aa13.6□□□□□ -0.23
CD40-207ENST00000620709 MSL2Q9HCI7 577 aa13.6□□□□□ -0.23
CD40-207ENST00000620709 TAS2R4Q9NYW5 299 aa13.6□□□□□ -0.23
CD40-207ENST00000620709 ZNF391Q9UJN7 358 aa13.6□□□□□ -0.23
CD40-207ENST00000620709 V9GY05 133 aa13.6□□□□□ -0.23
CD40-207ENST00000620709 AIPO00170 330 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 MTRF1O75570 445 aaKnown RBP13.59□□□□□ -0.23
CD40-207ENST00000620709 MAS1P04201 325 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 IGFBP3P17936 291 aaPredicted RBP13.59□□□□□ -0.23
CD40-207ENST00000620709 ANOS1P23352 680 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 PPP3R1P63098 170 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 SNAI3Q3KNW1 292 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 FAM209AQ5JX71 171 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 MBNL2Q5VZF2 373 aaKnown RBP13.59□□□□□ -0.23
CD40-207ENST00000620709 SERPINA12Q8IW75 414 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 MFSD4AQ8N468 514 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 PLPP7Q8NBV4 271 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 LYZL4Q96KX0 146 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 GFI1Q99684 422 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 RGCCQ9H4X1 137 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 PLEKHA1Q9HB21 404 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 CYSLTR2Q9NS75 346 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 COMMD3Q9UBI1 195 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 LOC105371242A0A075B767 164 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 DHRS3O75911 302 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 ADRA2CP18825 462 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 ATF1P18846 271 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 SCGB2A2Q13296 93 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 SPANXN2Q5MJ10 180 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 ASPHD2Q6ICH7 369 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 Q6ZSR3 168 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 LAX1Q8IWV1 398 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 FGGYQ96C11 551 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 C1QTNF5Q9BXJ0 243 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 POFUT1Q9H488 388 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 PLGRKTQ9HBL7 147 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 ABCB9Q9NP78 766 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 ABRACLQ9P1F3 81 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 ADAM30Q9UKF2 790 aa13.59□□□□□ -0.23
CD40-207ENST00000620709 MEGF11A6BM72 1044 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 C5orf63A6NC05 138 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 IFITM5A6NNB3 132 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 XRCC2O43543 280 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 VENTXO95231 258 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 IGHV2-5P01817 119 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 GNALP38405 381 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 ETV6P41212 452 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 TNFAIP6P98066 277 aaPredicted RBP13.58□□□□□ -0.24
CD40-207ENST00000620709 SPRNQ5BIV9 151 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 PEG10Q86TG7 708 aaKnown RBP13.58□□□□□ -0.24
CD40-207ENST00000620709 CCDC190Q86UF4 302 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 C1orf174Q8IYL3 243 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.58□□□□□ -0.24
CD40-207ENST00000620709 NKAIN3Q8N8D7 197 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 OR5D14Q8NGL3 314 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 OR14K1Q8NGZ2 314 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 BORCS5Q969J3 196 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 C10orf35Q96D05 121 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 ADAT3Q96EY9 351 aaPredicted RBP13.58□□□□□ -0.24
CD40-207ENST00000620709 REEP6Q96HR9 211 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 SLC30A2Q9BRI3 323 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 ZDHHC8Q9ULC8 765 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 V9GYS6 101 aa13.58□□□□□ -0.24
CD40-207ENST00000620709 A0A0G2JMP0 313 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 A0A0X1KG70 313 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 DHRS7CA6NNS2 312 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 SLC2A2P11168 524 aaPredicted RBP13.57□□□□□ -0.24
CD40-207ENST00000620709 CFPP27918 469 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 TNFSF8P32971 234 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 RBMXP38159 391 aaKnown RBP13.57□□□□□ -0.24
CD40-207ENST00000620709 DDOSTP39656 456 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 LCN2P80188 198 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 ZNF45Q02386 682 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 PSG7Q13046 419 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 DCTN2Q13561 401 aaKnown RBP13.57□□□□□ -0.24
CD40-207ENST00000620709 DCAF12L2Q5VW00 463 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 GLT8D1Q68CQ7 371 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 COLCA1Q6ZS62 124 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 PGAP1Q75T13 922 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 OR2Z1Q8NG97 314 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 OR4M2Q8NGB6 313 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 TRMT10AQ8TBZ6 339 aaKnown RBP13.57□□□□□ -0.24
CD40-207ENST00000620709 ZNF418Q8TF45 676 aaPredicted RBP13.57□□□□□ -0.24
CD40-207ENST00000620709 SGK3Q96BR1 496 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 CMBLQ96DG6 245 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 MRI1Q9BV20 369 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 MIXL1Q9H2W2 232 aa13.57□□□□□ -0.24
CD40-207ENST00000620709 RAB3AP20336 220 aa13.56□□□□□ -0.24
CD40-207ENST00000620709 EPHA1P21709 976 aa13.56□□□□□ -0.24
CD40-207ENST00000620709 TNFSF4P23510 183 aa13.56□□□□□ -0.24
CD40-207ENST00000620709 GLYATL3Q5SZD4 288 aa13.56□□□□□ -0.24
CD40-207ENST00000620709 HES5Q5TA89 166 aa13.56□□□□□ -0.24
CD40-207ENST00000620709 DNAAF1Q8NEP3 725 aa13.56□□□□□ -0.24
CD40-207ENST00000620709 OR1M1Q8NGA1 313 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms