RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	PPP1R3E	Q9H7J1	279 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	HEXA-AS1	Q9H8Q6	139 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	BIN3	Q9NQY0	253 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	NUDT15	Q9NV35	164 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	SELENOK	Q9Y6D0	94 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	MFSD2B	A6NFX1	497 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	ANXA2P2	A6NMY6	339 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	TNFSF11	O14788	317 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	MYL12B	O14950	172 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	ARPC3	O15145	178 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	TMEM127	O75204	238 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	MBP	P02686	304 aa	Predicted RBP	4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	CRYBA1	P05813	215 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	MSMB	P08118	114 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	MYL12A	P19105	171 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	TACR3	P29371	465 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	MTNR1A	P48039	350 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	INPP1	P49441	399 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	FOXL2	P58012	376 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR2B8P	P59922	312 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	RPS25	P62851	125 aa	Known RBP	4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	HNRNPA0	Q13151	305 aa	Known RBP	4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	SSX2	Q16385	188 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	THEM4	Q5T1C6	240 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	LCE3B	Q5TA77	95 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	GPR139	Q6DWJ6	353 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	FAAP20	Q6NZ36	180 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	ZNF529	Q6P280	563 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	CASP12	Q6UXS9	341 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	ZNF730	Q6ZMV8	503 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	SHF	Q7M4L6	423 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	RDH10	Q8IZV5	341 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR2T35	Q8NGX2	323 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	CCDC107	Q8WV48	283 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	ISOC2	Q96AB3	205 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	SLC25A36	Q96CQ1	311 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	RNFT2	Q96EX2	444 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	ATF6B	Q99941	703 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	C1QTNF5	Q9BXJ0	243 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	RGCC	Q9H4X1	137 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	MEPE	Q9NQ76	525 aa	Predicted RBP	4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	SIGLEC7	Q9Y286	467 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	CXCL13	O43927	109 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	PMP2	P02689	132 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	TRAPPC2	P0DI81	140 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	TRAPPC2B	P0DI82	140 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	IFNGR2	P38484	337 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	RORC	P51449	518 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	IL18	Q14116	193 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	FAM120AOS	Q5T036	256 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	LIPN	Q5VXI9	398 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	RAET1L	Q5VY80	246 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	TUSC5	Q8IXB3	177 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR4N5	Q8IXE1	308 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR5M9	Q8NGP3	310 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	OR5J2	Q8NH18	312 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	UFD1	Q92890	307 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	ELMOD3	Q96FG2	381 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	POM121L2	Q96KW2	1035 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	TECTB	Q96PL2	329 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	SSX3	Q99909	188 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	IFT27	Q9BW83	186 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	NMNAT2	Q9BZQ4	307 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	CMC2	Q9NRP2	79 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	INPP5E	Q9NRR6	644 aa		4.56	□□□□□ -1.68
CBWD3-215	ENST00000619322	TRAPPC13	A5PLN9	417 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322		A8MZ25	164 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	LMX1B	O60663	402 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	RRAS	P10301	218 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	PRG2	P13727	222 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	RAD52	P43351	418 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	SELENOP	P49908	381 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	RAB13	P51153	203 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	CRIP2	P52943	208 aa	Predicted RBP	4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	SLC25A1	P53007	311 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	ATP5J2	P56134	94 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	DEFA6	Q01524	100 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	ZNF74	Q16587	644 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	ZNF684	Q5T5D7	378 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	LIPK	Q5VXJ0	399 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	C22orf42	Q6IC83	251 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	ZNF322	Q6U7Q0	402 aa	Predicted RBP	4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	ZNF767P	Q75MW2	155 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	IZUMO1	Q8IYV9	350 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	BBS1	Q8NFJ9	593 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	MOSPD2	Q8NHP6	518 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	LINC01560	Q8TB33	94 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	DUSP19	Q8WTR2	217 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	OTUB1	Q96FW1	271 aa	Predicted RBP	4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	MARS2	Q96GW9	593 aa	Known RBP	4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	PGLYRP3	Q96LB9	341 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	C19orf24	Q9BVV8	132 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	SHARPIN	Q9H0F6	387 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	ZNF665	Q9H7R5	613 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	TVP23B	Q9NYZ1	205 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	CISD1	Q9NZ45	108 aa	Known RBP	4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	MED11	Q9P086	117 aa		4.55	□□□□□ -1.68
CBWD3-215	ENST00000619322	KPTN	Q9Y664	436 aa		4.55	□□□□□ -1.68

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