RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PCBP3P57721 371 aaKnown RBP13.56□□□□□ -0.24
COL5A1-208ENST00000618395 MIEN1Q9BRT3 115 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 A0A1B0GWA3 101 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 IGSF23A1L1A6 192 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 UTS2O95399 124 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 ALG14Q96F25 216 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 IL4P05112 153 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 FOLR2P14207 255 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 CRYBB2P43320 205 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 WDFY1Q8IWB7 410 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 C5orf17Q8NAS9 161 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 TP53I13Q8NBR0 393 aaPredicted RBP13.56□□□□□ -0.24
COL5A1-208ENST00000618395 IGSF8Q969P0 613 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 TMEM70Q9BUB7 260 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 IGLON5A6NGN9 336 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 CKS1BP61024 79 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 NTMQ9P121 344 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 ANKRD34CP0C6C1 535 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 CLDN18P56856 261 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 VN1R1Q9GZP7 353 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 LTB4R2Q9NPC1 389 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 OR2W1Q9Y3N9 320 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 LRRC30A6NM36 301 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 IGHA2P01877 340 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 LBX1P52954 281 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 SLC35E3Q7Z769 313 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 TMEM167BQ9NRX6 74 aa13.56□□□□□ -0.24
COL5A1-208ENST00000618395 TECRQ9NZ01 308 aaKnown RBP13.56□□□□□ -0.24
COL5A1-208ENST00000618395 NKX6-3A6NJ46 265 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 HOXA10P31260 410 aaPredicted RBP13.55□□□□□ -0.24
COL5A1-208ENST00000618395 THBS4P35443 961 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 MMP16P51512 607 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 RIPPLY3P57055 190 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 LMAN2Q12907 356 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 SHBQ15464 509 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 ACSM5Q6NUN0 579 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 ADAM20O43506 726 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 F12P00748 615 aaPredicted RBP13.55□□□□□ -0.24
COL5A1-208ENST00000618395 P01737 135 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 FBXO46Q6PJ61 603 aaPredicted RBP13.55□□□□□ -0.24
COL5A1-208ENST00000618395 SERINC4A6NH21 518 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 GP1BAP07359 652 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 KIR2DS3Q14952 304 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 OR11H7Q8NGC8 314 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 HINT3Q9NQE9 182 aaKnown RBP13.55□□□□□ -0.24
COL5A1-208ENST00000618395 LAMB1P07942 1786 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 SP1P08047 785 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 ARR3P36575 388 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 GUCA2AQ02747 115 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 Q7L0L9 218 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 NCOR1O75376 2440 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 GPR75O95800 540 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 OR5AS1Q8N127 324 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 TMPRSS13Q9BYE2 586 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 CES1P1Q9UKY3 287 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 A0A1B0GUL6 1792 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 SPNS3Q6ZMD2 512 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 PLIN4Q96Q06 1357 aa13.55□□□□□ -0.24
COL5A1-208ENST00000618395 MT-ND6P03923 174 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 PTOV1Q86YD1 416 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 SLC25A19Q9HC21 320 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 JKAMPQ9P055 326 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 OPN4Q9UHM6 478 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 TINAGQ9UJW2 476 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 POLDIP2Q9Y2S7 368 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 ZNF252P-AS1Q0IIN9 211 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 FAM27D1Q5T7N8 215 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 FAHD1Q6P587 224 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 RBM45Q8IUH3 476 aaKnown RBP13.54□□□□□ -0.24
COL5A1-208ENST00000618395 EDARADDQ8WWZ3 215 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 GALMQ96C23 342 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 F5P12259 2224 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 SEMG1P04279 462 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 ELNP15502 786 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 CLEC14AQ86T13 490 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 CALHM2Q9HA72 323 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 FREM3P0C091 2139 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 F5H697 171 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 SIRPB1O00241 398 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 OSTM1Q86WC4 334 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 ABHD17BQ5VST6 288 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 SGMS2Q8NHU3 365 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 C1QTNF6Q9BXI9 259 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 SFT2D2O95562 160 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 OR1D5P58170 312 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 CBARPQ8N350 705 aaPredicted RBP13.54□□□□□ -0.24
COL5A1-208ENST00000618395 Q96M85 177 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 BCL9O00512 1426 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 TMEM189-UBE2V1I3L0A0 370 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 EVX2Q03828 476 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 FUT7Q11130 342 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 GUCA2BQ16661 112 aa13.54□□□□□ -0.24
COL5A1-208ENST00000618395 GRASPQ7Z6J2 395 aaPredicted RBP13.54□□□□□ -0.24
COL5A1-208ENST00000618395 ZNF418Q8TF45 676 aaPredicted RBP13.54□□□□□ -0.24
COL5A1-208ENST00000618395 C19orf67A6NJJ6 358 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 SMG9Q9H0W8 520 aaKnown RBP13.53□□□□□ -0.24
COL5A1-208ENST00000618395 CXorf36Q9H7Y0 433 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 SLC17A2O00624 439 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 TAPBPO15533 448 aa13.53□□□□□ -0.24
COL5A1-208ENST00000618395 GNG7O60262 68 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms