RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 CATSPERDQ86XM0 798 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 GPR137CQ8N3F9 429 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 FAM24BQ8N5W8 94 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 ST7LQ8TDW4 575 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 GPX8Q8TED1 209 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 ZNF845Q96IR2 970 aaPredicted RBP12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 SMIM3Q9BZL3 60 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 FN3KRPQ9HA64 309 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 IL17BQ9UHF5 180 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 IGLV3-12A0A075B6K2 115 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 IGHV1-45A0A0A0MS14 117 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 A0A0J9YW62 118 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 MED19A0JLT2 244 aaPredicted RBP12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 COX6A1P12074 109 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 RAB6AP20340 208 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 PSMB6P28072 239 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 CDPF1Q6NVV7 123 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 SKA3Q8IX90 412 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 DMBX1Q8NFW5 382 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 OR10S1Q8NGN2 331 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 OR2Y1Q8NGV0 311 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 AKR7LQ8NHP1 331 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 TCTEX1D2Q8WW35 142 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 IP6K3Q96PC2 410 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 SLC25A21Q9BQT8 299 aaPredicted RBP12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 C12orf49Q9H741 205 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 LHFPL6Q9Y693 200 aa12.73□□□□□ -0.37
SHROOM1-208ENST00000617339 CACNA1BQ00975 2339 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 ATMQ13315 3056 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 A0A096LPE4 126 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 TRBV5-5A0A0J9YX44 114 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 A0A1B0GV90 55 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 A0A1W2PPZ6 126 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 ADAP1O75689 374 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 YIF1AO95070 293 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 TTRP02766 147 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 GUSBP08236 651 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 B4GALT1P15291 398 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 LYG2Q86SG7 212 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 STX12Q86Y82 276 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 MRI1Q9BV20 369 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 KLK13Q9UKR3 277 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 LOC100289279A0A1B0GTE1 492 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 C9orf170A2RU37 121 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 PHYHO14832 338 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 CRTAPO75718 401 aaPredicted RBP12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 FAHP16930 419 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 LPAR6P43657 344 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 CX3CR1P49238 355 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 DEFA6Q01524 100 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 NEK7Q8TDX7 302 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 ACKR4Q9NPB9 350 aa12.72□□□□□ -0.37
SHROOM1-208ENST00000617339 CCDC163A0A0D9SF12 145 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 E9PLN8 166 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 FGF16O43320 207 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 IGHV2-70P01814 119 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 GLI4P10075 376 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 EXT1Q16394 746 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 MST1LQ2TV78 715 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 PDZD11Q5EBL8 140 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 ZSCAN4Q8NAM6 433 aaPredicted RBP12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 ST6GALNAC5Q9BVH7 336 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 G6PC2Q9NQR9 355 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 CACNA1AO00555 2505 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 ATRXP46100 2492 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 UBE2CO00762 179 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 TOX3O15405 576 aaPredicted RBP12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 CD74P04233 296 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 CD79AP11912 226 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 ARFRP1Q13795 201 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 TMEM104Q8NE00 496 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 DOCK10Q96BY6 2186 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 CHD8Q9HCK8 2581 aa12.71□□□□□ -0.37
SHROOM1-208ENST00000617339 SLC17A2O00624 439 aa12.71□□□□□ -0.38
SHROOM1-208ENST00000617339 TRAF3IP2O43734 574 aaPredicted RBP12.71□□□□□ -0.38
SHROOM1-208ENST00000617339 LCATP04180 440 aa12.71□□□□□ -0.38
SHROOM1-208ENST00000617339 SERPINA2P20848 420 aa12.71□□□□□ -0.38
SHROOM1-208ENST00000617339 ZNF93P35789 620 aaPredicted RBP12.71□□□□□ -0.38
SHROOM1-208ENST00000617339 CARD18P57730 90 aa12.71□□□□□ -0.38
SHROOM1-208ENST00000617339 DHRS11Q6UWP2 260 aa12.71□□□□□ -0.38
SHROOM1-208ENST00000617339 B4GALT7Q9UBV7 327 aa12.71□□□□□ -0.38
SHROOM1-208ENST00000617339 SDCBPO00560 298 aaPredicted RBP12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 ANGPTL7O43827 346 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 ZNF432O94892 652 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 PMP2P02689 132 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 CELA3AP09093 270 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 OR3A4PP47883 348 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 RAB2AP61019 212 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 GLIPR1L1Q6UWM5 242 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 ZNF100Q8IYN0 542 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 CD300LFQ8TDQ1 290 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 TAAR9Q96RI9 348 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 ALX4Q9H161 411 aaPredicted RBP12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 CRLF2Q9HC73 371 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 FAM230AA0A1W2PPH8 454 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 FAM221AA4D161 298 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 SYNGR4O95473 234 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 IFNA6P05013 189 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 CD96P40200 585 aa12.7□□□□□ -0.38
SHROOM1-208ENST00000617339 TMEM244Q5VVB8 128 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms