RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 MDFIQ99750 246 aa13.88□□□□□ -0.19
CBWD3-211ENST00000615061 NUDT16L1Q9BRJ7 211 aaKnown RBP13.88□□□□□ -0.19
CBWD3-211ENST00000615061 NLKQ9UBE8 527 aa13.88□□□□□ -0.19
CBWD3-211ENST00000615061 RGS9O75916 674 aaPredicted RBP13.87□□□□□ -0.19
CBWD3-211ENST00000615061 LALBAP00709 142 aa13.87□□□□□ -0.19
CBWD3-211ENST00000615061 PLATP00750 562 aa13.87□□□□□ -0.19
CBWD3-211ENST00000615061 NPY4RP50391 375 aa13.87□□□□□ -0.19
CBWD3-211ENST00000615061 GBX2P52951 348 aaPredicted RBP13.87□□□□□ -0.19
CBWD3-211ENST00000615061 ST3GAL4Q11206 333 aa13.87□□□□□ -0.19
CBWD3-211ENST00000615061 BPIFB6Q8NFQ5 453 aa13.87□□□□□ -0.19
CBWD3-211ENST00000615061 OR13C3Q8NGS6 347 aa13.87□□□□□ -0.19
CBWD3-211ENST00000615061 C22orf15Q8WYQ4 148 aa13.87□□□□□ -0.19
CBWD3-211ENST00000615061 ST8SIA4Q92187 359 aa13.87□□□□□ -0.19
CBWD3-211ENST00000615061 METRNQ9UJH8 293 aa13.87□□□□□ -0.19
CBWD3-211ENST00000615061 SLC7A11Q9UPY5 501 aa13.87□□□□□ -0.19
CBWD3-211ENST00000615061 SIRT4Q9Y6E7 314 aaPredicted RBP13.87□□□□□ -0.19
CBWD3-211ENST00000615061 IGKV1D-17A0A075B6S4 117 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 KIR2DS1A0A191URI9 304 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 OR2AT4A6NND4 320 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 GATBO75879 557 aaKnown RBP13.86□□□□□ -0.19
CBWD3-211ENST00000615061 INMTO95050 263 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 SERPINA3P01011 423 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 FSHBP01225 129 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 PGA5P0DJD9 388 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 ZNF20P17024 532 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 KLF17Q5JT82 389 aaPredicted RBP13.86□□□□□ -0.19
CBWD3-211ENST00000615061 BTNL3Q6UXE8 466 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 AHSA2Q719I0 299 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 RNF144BQ7Z419 303 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 EGFL6Q8IUX8 553 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 POC1AQ8NBT0 407 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 OR5AK2Q8NH90 309 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 NANPQ8TBE9 248 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 GATAD2BQ8WXI9 593 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 PP6455Q8WZ26 134 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 TMIGD2Q96BF3 282 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 C10orf35Q96D05 121 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 GAFA1Q96PS6 74 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 MRI1Q9BV20 369 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 PSORS1C1Q9UIG5 152 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 CAB39Q9Y376 341 aaPredicted RBP13.86□□□□□ -0.19
CBWD3-211ENST00000615061 TRBV2A0A0J9YWF9 115 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 IRGMA1A4Y4 181 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 PSG2P11465 335 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 MYL12AP19105 171 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 EPHA1P21709 976 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 MPZP25189 248 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 C21orf33P30042 268 aaPredicted RBP13.86□□□□□ -0.19
CBWD3-211ENST00000615061 TGM4P49221 684 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 DGUOKQ16854 277 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 ATPAF1Q5TC12 328 aaPredicted RBP13.86□□□□□ -0.19
CBWD3-211ENST00000615061 ACP7Q6ZNF0 438 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 ZNF788Q6ZQV5 615 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 BTN2A1Q7KYR7 527 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 SLC36A1Q7Z2H8 476 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 RGP1Q92546 391 aaPredicted RBP13.86□□□□□ -0.19
CBWD3-211ENST00000615061 BORCS8Q96FH0 119 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 OCEL1Q9H607 264 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 ZNF222Q9UK12 451 aa13.86□□□□□ -0.19
CBWD3-211ENST00000615061 EXOSC1Q9Y3B2 195 aaKnown RBP13.86□□□□□ -0.19
CBWD3-211ENST00000615061 TMEM212A6NML5 194 aa13.85□□□□□ -0.19
CBWD3-211ENST00000615061 F8VVB4 439 aa13.85□□□□□ -0.19
CBWD3-211ENST00000615061 F8VWA3 439 aa13.85□□□□□ -0.19
CBWD3-211ENST00000615061 GABRA2P47869 451 aa13.85□□□□□ -0.19
CBWD3-211ENST00000615061 FUT6P51993 359 aa13.85□□□□□ -0.19
CBWD3-211ENST00000615061 MRPL28Q13084 256 aaKnown RBP13.85□□□□□ -0.19
CBWD3-211ENST00000615061 DOC2BQ14184 412 aa13.85□□□□□ -0.19
CBWD3-211ENST00000615061 CDK5R1Q15078 307 aa13.85□□□□□ -0.19
CBWD3-211ENST00000615061 TMPRSS11AQ6ZMR5 421 aa13.85□□□□□ -0.19
CBWD3-211ENST00000615061 OR13C9Q8NGT0 318 aa13.85□□□□□ -0.19
CBWD3-211ENST00000615061 SPACA5Q96QH8 159 aa13.85□□□□□ -0.19
CBWD3-211ENST00000615061 NRIP2Q9BQI9 281 aa13.85□□□□□ -0.19
CBWD3-211ENST00000615061 COMMD4Q9H0A8 199 aa13.85□□□□□ -0.19
CBWD3-211ENST00000615061 PLCXD1Q9NUJ7 323 aa13.85□□□□□ -0.19
CBWD3-211ENST00000615061 IGHV3OR16-10A0A075B7F0 116 aa13.84□□□□□ -0.19
CBWD3-211ENST00000615061 H0YJX3 145 aa13.84□□□□□ -0.19
CBWD3-211ENST00000615061 ENSAO43768 121 aaKnown RBP13.84□□□□□ -0.19
CBWD3-211ENST00000615061 CCDC159P0C7I6 412 aa13.84□□□□□ -0.19
CBWD3-211ENST00000615061 PIPP12273 146 aaPredicted RBP13.84□□□□□ -0.19
CBWD3-211ENST00000615061 ATF1P18846 271 aa13.84□□□□□ -0.19
CBWD3-211ENST00000615061 AZGP1P25311 298 aaKnown RBP13.84□□□□□ -0.19
CBWD3-211ENST00000615061 CEBPDP49716 269 aaPredicted RBP13.84□□□□□ -0.19
CBWD3-211ENST00000615061 CNN3Q15417 329 aaKnown RBP13.84□□□□□ -0.19
CBWD3-211ENST00000615061 ARMCX4Q5H9R4 360 aa13.84□□□□□ -0.19
CBWD3-211ENST00000615061 CD276Q5ZPR3 534 aa13.84□□□□□ -0.19
CBWD3-211ENST00000615061 UTS2BQ765I0 119 aa13.84□□□□□ -0.19
CBWD3-211ENST00000615061 ZFP41Q8N8Y5 198 aa13.84□□□□□ -0.19
CBWD3-211ENST00000615061 ZNF485Q8NCK3 441 aa13.84□□□□□ -0.19
CBWD3-211ENST00000615061 ZNRF1Q8ND25 227 aa13.84□□□□□ -0.19
CBWD3-211ENST00000615061 SLAMF9Q96A28 289 aa13.84□□□□□ -0.19
CBWD3-211ENST00000615061 PKIBQ9C010 78 aa13.84□□□□□ -0.19
CBWD3-211ENST00000615061 BABAM2Q9NXR7 383 aa13.84□□□□□ -0.19
CBWD3-211ENST00000615061 MTCH1Q9NZJ7 389 aa13.84□□□□□ -0.19
CBWD3-211ENST00000615061 CNOT2Q9NZN8 540 aaKnown RBP13.84□□□□□ -0.19
CBWD3-211ENST00000615061 POLDIP2Q9Y2S7 368 aa13.84□□□□□ -0.19
CBWD3-211ENST00000615061 MAB21L2Q9Y586 359 aa13.84□□□□□ -0.19
CBWD3-211ENST00000615061 EFCAB10A6NFE3 127 aa13.83□□□□□ -0.19
CBWD3-211ENST00000615061 RFPL4AA6NLU0 287 aa13.83□□□□□ -0.19
CBWD3-211ENST00000615061 RFPL4AL1F8VTS6 287 aa13.83□□□□□ -0.19
CBWD3-211ENST00000615061 SIGLEC5O15389 551 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms