RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 SLC17A2O00624 439 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 PLATP00750 562 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 COL8A2P25067 703 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 HTR2CP28335 458 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 RPS19P39019 145 aaKnown RBP12.41□□□□□ -0.42
CD48-203ENST00000613788 PMELP40967 661 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 OR10A3P58181 314 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 ZP1P60852 638 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 DEFB113Q30KQ7 82 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 CRIP3Q6Q6R5 217 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 WDR82Q6UXN9 313 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 ZNF826PQ6ZT77 177 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 PXT1Q8NFP0 134 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 OR5D18Q8NGL1 313 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 OR6M1Q8NGM8 313 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 OR51F2Q8NH61 342 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 C12orf43Q96C57 262 aaKnown RBP12.41□□□□□ -0.42
CD48-203ENST00000613788 DGCR14Q96DF8 476 aaKnown RBP12.41□□□□□ -0.42
CD48-203ENST00000613788 MBD6Q96DN6 1003 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 GFI1Q99684 422 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 FAM192AQ9GZU8 254 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 DCSTAMPQ9H295 470 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 TMEM106BQ9NUM4 274 aa12.41□□□□□ -0.42
CD48-203ENST00000613788 IFITM5A6NNB3 132 aa12.4□□□□□ -0.42
CD48-203ENST00000613788 H3BMQ9 156 aa12.4□□□□□ -0.42
CD48-203ENST00000613788 TRAPPC2LH3BP13 241 aa12.4□□□□□ -0.42
CD48-203ENST00000613788 SPRY1O43609 319 aaPredicted RBP12.4□□□□□ -0.42
CD48-203ENST00000613788 SYNGR1O43759 233 aa12.4□□□□□ -0.42
CD48-203ENST00000613788 NOS1APO75052 506 aaPredicted RBP12.4□□□□□ -0.42
CD48-203ENST00000613788 RHBDL1O75783 438 aa12.4□□□□□ -0.42
CD48-203ENST00000613788 IGHV4-39P01824 125 aa12.4□□□□□ -0.42
CD48-203ENST00000613788 CLEC2LP0C7M8 214 aa12.4□□□□□ -0.42
CD48-203ENST00000613788 OR3A4PP47883 348 aa12.4□□□□□ -0.42
CD48-203ENST00000613788 LRRC75A-AS1Q8N1F1 130 aa12.4□□□□□ -0.42
CD48-203ENST00000613788 LRRC29Q8WV35 223 aa12.4□□□□□ -0.42
CD48-203ENST00000613788 PERPQ96FX8 193 aa12.4□□□□□ -0.42
CD48-203ENST00000613788 RHOFQ9HBH0 211 aa12.4□□□□□ -0.42
CD48-203ENST00000613788 SMURF1Q9HCE7 757 aa12.4□□□□□ -0.42
CD48-203ENST00000613788 PCDHB16Q9NRJ7 776 aa12.4□□□□□ -0.42
CD48-203ENST00000613788 TREM2Q9NZC2 230 aa12.4□□□□□ -0.42
CD48-203ENST00000613788 GHRLQ9UBU3 117 aa12.4□□□□□ -0.42
CD48-203ENST00000613788 ING4Q9UNL4 249 aa12.4□□□□□ -0.42
CD48-203ENST00000613788 MRPS28Q9Y2Q9 187 aaKnown RBP12.4□□□□□ -0.42
CD48-203ENST00000613788 SMIM30A4D0T7 59 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 AIPO00170 330 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 SSX4O60224 188 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 TMEM127O75204 238 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 ZNF780AO75290 641 aaPredicted RBP12.39□□□□□ -0.43
CD48-203ENST00000613788 LY6HO94772 140 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 UBBP0CG47 229 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 CAPZA1P52907 286 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 TMEM33P57088 247 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 GPR176Q14439 515 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 RSU1Q15404 277 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 RAB11BQ15907 218 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 AWAT2Q6E213 333 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 ASCL4Q6XD76 172 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 PEG10Q86TG7 708 aaKnown RBP12.39□□□□□ -0.43
CD48-203ENST00000613788 CDH24Q86UP0 819 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 Q8IYB0 196 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 POC1AQ8NBT0 407 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 OR4D6Q8NGJ1 314 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 NDNFQ8TB73 568 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 YIPF5Q969M3 257 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 SLC25A46Q96AG3 418 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 CEP19Q96LK0 163 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 NKX3-1Q99801 234 aaPredicted RBP12.39□□□□□ -0.43
CD48-203ENST00000613788 METTL9Q9H1A3 318 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 CHODLQ9H9P2 273 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 ELL3Q9HB65 397 aaPredicted RBP12.39□□□□□ -0.43
CD48-203ENST00000613788 MTCH1Q9NZJ7 389 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 STEAP1Q9UHE8 339 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 CACNG2Q9Y698 323 aa12.39□□□□□ -0.43
CD48-203ENST00000613788 A0A0G2JK05 382 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 CLDN25C9JDP6 229 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 LYNX1G3V0Z9 82 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 TMEM178BH3BS89 294 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 AKR7A2O43488 359 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 ANGPTL7O43827 346 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 LHBP01229 141 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 CSTBP04080 98 aaKnown RBP12.38□□□□□ -0.43
CD48-203ENST00000613788 PGA5P0DJD9 388 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 LYNX1P0DP58 116 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 CFPP27918 469 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 RORCP51449 518 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 CAV3P56539 151 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 SPCS2Q15005 226 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 HES5Q5TA89 166 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 FAM166AQ6J272 317 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 SFXN4Q6P4A7 337 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 GLIPR1L1Q6UWM5 242 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 C1QL2Q7Z5L3 287 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 NR2C2APQ86WQ0 139 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 GCSAMQ8N6F7 178 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 TBC1D15Q8TC07 691 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 SLAMF9Q96A28 289 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 RASL12Q9NYN1 266 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 NPTNQ9Y639 398 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 CENPEQ02224 2701 aa12.38□□□□□ -0.43
CD48-203ENST00000613788 HECTD1Q9ULT8 2610 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms