RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 POC1AQ8NBT0 407 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 OIT3Q8WWZ8 545 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 SPACA9Q96E40 222 aaPredicted RBP12.29□□□□□ -0.44
COL6A1-207ENST00000612273 NDRG3Q9UGV2 375 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 PADI1Q9ULC6 663 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 OSGIN2Q9Y236 505 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 DNAJC13O75165 2243 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 MEX3AA1L020 520 aaKnown RBP12.29□□□□□ -0.44
COL6A1-207ENST00000612273 IFNA21P01568 189 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 B4GALT1P15291 398 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 MSR1P21757 451 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 CLINT1Q14677 625 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 SLC16A13Q7RTY0 426 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 PPP1R3BQ86XI6 285 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 OR6X1Q8NH79 312 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 IP6K3Q96PC2 410 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 RSRP1Q9BUV0 290 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 ZFP57Q9NU63 452 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 TSPAN15O95858 294 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 ARG1P05089 322 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 ZNF806P0C7X5 589 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 TAS2R46P59540 309 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 ECH1Q13011 328 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 ZNF774Q6NX45 483 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 ZNF529Q6P280 563 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 SCGB3A2Q96PL1 93 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 SPSB2Q99619 263 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 OCSTAMPQ9BR26 566 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 SH3BGRL3Q9H299 93 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 RCC2Q9P258 522 aaKnown RBP12.29□□□□□ -0.44
COL6A1-207ENST00000612273 GEMIN2O14893 280 aaKnown RBP12.28□□□□□ -0.44
COL6A1-207ENST00000612273 OR13C7P0DN81 318 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 SRFP11831 508 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 RPS2P15880 293 aaKnown RBP12.28□□□□□ -0.44
COL6A1-207ENST00000612273 MIDNQ504T8 468 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 AVPI1Q5T686 147 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 RP1L1Q8IWN7 2480 aaPredicted RBP12.28□□□□□ -0.44
COL6A1-207ENST00000612273 OR2B8PP59922 312 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 NHLH2Q02577 135 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 RSPO1Q2MKA7 263 aaPredicted RBP12.28□□□□□ -0.44
COL6A1-207ENST00000612273 SHEQ5VZ18 495 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 FAM180AQ6UWF9 173 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 GJC3Q8NFK1 279 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 SLC22A8Q8TCC7 542 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 ADAMTS17Q8TE56 1095 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 EMG1Q92979 244 aaKnown RBP12.28□□□□□ -0.44
COL6A1-207ENST00000612273 MR1Q95460 341 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 SLAMF9Q96A28 289 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 MARS2Q96GW9 593 aaKnown RBP12.28□□□□□ -0.44
COL6A1-207ENST00000612273 RAB33BQ9H082 229 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 EDARQ9UNE0 448 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 MEMO1Q9Y316 297 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 PTRH2Q9Y3E5 179 aaKnown RBP12.28□□□□□ -0.44
COL6A1-207ENST00000612273 FREM1Q5H8C1 2179 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 C10orf142B7Z368 130 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 CAV2P51636 162 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 RBMS3Q6XE24 437 aaKnown RBP12.28□□□□□ -0.44
COL6A1-207ENST00000612273 SHDQ96IW2 340 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 KIRREL1Q96J84 757 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 CNTNAP3Q9BZ76 1288 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 MAGT1Q9H0U3 335 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 PARPBPQ9NWS1 579 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 C1orf123Q9NWV4 160 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 AK3Q9UIJ7 227 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 MTCH2Q9Y6C9 303 aa12.28□□□□□ -0.44
COL6A1-207ENST00000612273 LINC01387J3KSC0 135 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 NDUFA2O43678 99 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 DHRS3O75911 302 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 PET100P0DJ07 73 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 SLC22A25Q6T423 547 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 FBXL14Q8N1E6 418 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 RTN4IP1Q8WWV3 396 aaPredicted RBP12.27□□□□□ -0.45
COL6A1-207ENST00000612273 SGK3Q96BR1 496 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 CCDC74BQ96LY2 380 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 PRRX2Q99811 253 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 TMEM100Q9NV29 134 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 P4HTMQ9NXG6 502 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 DKKL1Q9UK85 242 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 R4GN57 208 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 CPAMD8Q8IZJ3 1885 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 TRBV6-7A0A0A0MS04 114 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 TRAPPC6AO75865 159 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 S100A6P06703 90 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 RD3LP0DJH9 198 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 DUSP1P28562 367 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 RFC3P40938 356 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 ENDOGQ14249 297 aaKnown RBP12.27□□□□□ -0.45
COL6A1-207ENST00000612273 ADAM5Q6NVV9 412 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 CRIP3Q6Q6R5 217 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 LHFPL1Q86WI0 220 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 OR52M1Q8NGK5 317 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 NANPQ8TBE9 248 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 PIGCQ92535 297 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 AQP10Q96PS8 301 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 NAA11Q9BSU3 229 aaPredicted RBP12.27□□□□□ -0.45
COL6A1-207ENST00000612273 MOB1AQ9H8S9 216 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 SPACA1Q9HBV2 294 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 CRLF2Q9HC73 371 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 CACNA1DQ01668 2161 aa12.27□□□□□ -0.45
COL6A1-207ENST00000612273 A0A1W2PNV4 684 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms