RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 PGA3P0DJD8 388 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 GAS1P54826 345 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 PRDX4Q13162 271 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 MOGAT2Q3SYC2 334 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 JMJD6Q6NYC1 403 aaPredicted RBP11.57□□□□□ -0.56
TCF3-220ENST00000611869 RGP1Q92546 391 aaPredicted RBP11.57□□□□□ -0.56
TCF3-220ENST00000611869 CA10Q9NS85 328 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 MEX3AA1L020 520 aaKnown RBP11.57□□□□□ -0.56
TCF3-220ENST00000611869 IL2RAP01589 272 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 CPN1P15169 458 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 CA6P23280 308 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 S100A2P29034 98 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 PCOLCEQ15113 449 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 CXorf67Q86X51 503 aaPredicted RBP11.57□□□□□ -0.56
TCF3-220ENST00000611869 ZNF808Q8N4W9 903 aaPredicted RBP11.57□□□□□ -0.56
TCF3-220ENST00000611869 A0A087WV48 116 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 LYZL6O75951 148 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 GP1BAP07359 652 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 CTXN2P0C2S0 81 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 EFNB1P98172 346 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 TMEM104Q8NE00 496 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 ZNF285Q96NJ3 590 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 GPR87Q9BY21 358 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 DYNLRB1Q9NP97 96 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 OPN4Q9UHM6 478 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 PRR19A6NJB7 356 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 B4E171 279 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 TRAF3IP2O43734 574 aaPredicted RBP11.57□□□□□ -0.56
TCF3-220ENST00000611869 RAMP1O60894 148 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 TSPAN7P41732 249 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 RNPS1Q15287 305 aaKnown RBP11.57□□□□□ -0.56
TCF3-220ENST00000611869 LGALSLQ3ZCW2 172 aaPredicted RBP11.57□□□□□ -0.56
TCF3-220ENST00000611869 SUMF2Q8NBJ7 301 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 DMBX1Q8NFW5 382 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 OR5AP2Q8NGF4 316 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 PLEKHF2Q9H8W4 249 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 PROCRQ9UNN8 238 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 LHFPL6Q9Y693 200 aa11.57□□□□□ -0.56
TCF3-220ENST00000611869 TRBV5-7A0A0A0MS05 114 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 A0A0G2JK05 382 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 RNF212BA8MTL3 300 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 RAB5BP61020 215 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 MRPS34P82930 218 aaKnown RBP11.56□□□□□ -0.56
TCF3-220ENST00000611869 FAM181AQ8N9Y4 354 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 DEFB108BQ8NET1 73 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 RSPO3Q9BXY4 272 aaPredicted RBP11.56□□□□□ -0.56
TCF3-220ENST00000611869 PECRQ9BY49 303 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 ANGPTL4Q9BY76 406 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 CACNA1DQ01668 2161 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 TRAV17A0A0B4J275 112 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 H7C1Q1 480 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 BCL2L11O43521 198 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 ACTL6BO94805 426 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 GSK3AP49840 483 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 CLLU1Q5K131 121 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 PIGMQ9H3S5 423 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 TMEM38BQ9NVV0 291 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 ZNF391Q9UJN7 358 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 TP53TG5Q9Y2B4 290 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 TOR1AO14656 332 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 RGS13O14921 159 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 TSPO2Q5TGU0 170 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 FBXW5Q969U6 566 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 FAM131CQ96AQ9 280 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 GPR35Q9HC97 309 aa11.56□□□□□ -0.56
TCF3-220ENST00000611869 ELF5Q9UKW6 265 aaPredicted RBP11.56□□□□□ -0.56
TCF3-220ENST00000611869 PUS1Q9Y606 427 aaKnown RBP eCLIP11.56□□□□□ -0.56
TCF3-220ENST00000611869 TP53BP1Q12888 1972 aaPredicted RBP11.56□□□□□ -0.56
TCF3-220ENST00000611869 IGKV1D-43A0A0B4J1Z2 117 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 SPAARA0A1B0GVQ0 90 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 SH2D1BO14796 132 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 GNG3P63215 75 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 ZNF266Q14584 549 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 MICBQ29980 383 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 OR2M7Q8NG81 312 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 HAS2Q92819 552 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 SNRNP200O75643 2136 aaKnown RBP11.55□□□□□ -0.56
TCF3-220ENST00000611869 PDCD6O75340 191 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 DUS4LO95620 317 aaKnown RBP11.55□□□□□ -0.56
TCF3-220ENST00000611869 GLAP06280 429 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 COX6A1P12074 109 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 GABRA1P14867 456 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 RPL35P42766 123 aaKnown RBP11.55□□□□□ -0.56
TCF3-220ENST00000611869 OR8B8Q15620 311 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 AANATQ16613 207 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 FAM219AQ8IW50 185 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 OR5M8Q8NGP6 311 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 HGDQ93099 445 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 KLK13Q9UKR3 277 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 GEMIN2O14893 280 aaKnown RBP11.55□□□□□ -0.56
TCF3-220ENST00000611869 SSSCA1O60232 199 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 NME2P1O60361 137 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 SFT2D2O95562 160 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 MPC2O95563 127 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 CRYAAP02489 173 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 VSIG10L2P0DP72 767 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 RPS11P62280 158 aaKnown RBP eCLIP11.55□□□□□ -0.56
TCF3-220ENST00000611869 RAB32Q13637 225 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 SLC30A7Q8NEW0 376 aa11.55□□□□□ -0.56
TCF3-220ENST00000611869 CLDN23Q96B33 292 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms